Fix cli tests #28
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Fix cli tests #28
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sambenfredj
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- Remove test_cli_pepxml because xml files don't work with streaming - Replace old output file names - Add random generator 'rng' variable to confidence since it is required for proteins - Remove subset_max_train from PluginModel - Fix bug: convert targets column after reading in chunks - Fix peptide column name for confidence - Fix test cli plugins : replace DecisionTreeClassifier with LinearSVC BECAUSE DecisionTreeClassifier return scores as 0 or 1
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gessulat
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- Remove test_cli_pepxml because xml files don't work with streaming - Replace old output file names - Add random generator 'rng' variable to confidence since it is required for proteins - Remove subset_max_train from PluginModel - Fix bug: convert targets column after reading in chunks - Fix peptide column name for confidence - Fix test cli plugins : replace DecisionTreeClassifier with LinearSVC BECAUSE DecisionTreeClassifier return scores as 0 or 1
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closes #23