test conda build #2212
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Python package | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.8', '3.10'] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: actions/cache@v2 | |
| with: | |
| path: | | |
| ~/.cache/pip | |
| ${{ env.pythonLocation }}/bin/* | |
| ${{ env.pythonLocation }}/include | |
| ${{ env.pythonLocation }}/lib/python*/site-packages/* | |
| !${{ env.pythonLocation }}/bin/pip* | |
| !${{ env.pythonLocation }}/lib/python*/site-packages/pip* | |
| !${{ env.pythonLocation }}/lib/python*/site-packages/setuptools* | |
| key: ${{ env.pythonLocation }}-${{ hashFiles('setup.py') }}-${{ hashFiles('requirements.txt') }} | |
| - name: Install CXX Dependencies | |
| run: sudo apt-get update && sudo apt-get install -yq gfortran libboost-dev libboost-serialization-dev liblapack-dev | |
| - name: Install MongoDB | |
| uses: supercharge/mongodb-github-action@1.3.0 | |
| - name: Install Python Dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install --upgrade --upgrade-strategy eager pytest pytest-cov | |
| if [ -f requirements.txt ]; then pip install --upgrade --upgrade-strategy eager -r requirements.txt; fi | |
| - name: Install Apache Spark | |
| run: | | |
| mkdir -p /opt | |
| wget -q -O /opt/spark.tgz https://archive.apache.org/dist/spark/spark-3.0.0/spark-3.0.0-bin-hadoop2.7.tgz | |
| tar xzf /opt/spark.tgz -C /opt/ | |
| rm /opt/spark.tgz | |
| export SPARK_HOME=/opt/spark-3.0.0-bin-hadoop2.7 | |
| echo "SPARK_HOME=/opt/spark-3.0.0-bin-hadoop2.7" >> $GITHUB_ENV | |
| export PATH=$PATH:/opt/spark-3.0.0-bin-hadoop2.7/bin | |
| echo "/opt/spark-3.0.0-bin-hadoop2.7/bin" >> $GITHUB_PATH | |
| python -m pip install --upgrade --upgrade-strategy eager pyspark pytest-spark | |
| - name: Install | |
| run: python -m pip install -C--global-option=build -C--global-option=--debug -v . | |
| - name: Test with pytest | |
| run: | | |
| export MSPASS_HOME=$(pwd) | |
| export SPARK_LOCAL_IP=127.0.0.1 | |
| pytest --cov=mspasspy python/tests/ | |
| make test -C build/temp.*/ | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| fail_ci_if_error: false | |
| token: ${{ secrets.CODECOV_TOKEN }} # required | |
| env_vars: OS,PYTHON | |
| verbose: true | |
| - name: Build Documentation | |
| if: ${{ matrix.python-version == '3.8' }} | |
| run: | | |
| export MSPASS_HOME=$(pwd) | |
| sudo apt-get update && sudo apt-get install -yq doxygen pandoc | |
| pip install -r docs/requirements.txt | |
| cd docs | |
| ls | |
| make html | |
| - name: Deploy to GitHub Pages | |
| if: ${{ github.ref == 'refs/heads/master' && matrix.python-version == '3.8' }} | |
| uses: JamesIves/github-pages-deploy-action@3.7.1 | |
| with: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| BRANCH: gh-pages | |
| FOLDER: docs/build/html | |
| CLEAN: false | |