Orbit Image Analysis

A versatile image analysis software for biological image-based quantification.

News:

• 3.64: "illegal argument" constructor initialization bugfix, support for Omero/websockets, added scrollbars for class admin frame
• 3.63: bugfix for Orbit not starting up if OmeroOrbit.properties.template was not existing in home directory
• 3.62: using image-provider-omero:1.7.2 for Omero 5.6.x, new keyboard shortcuts, bugfixes

Available backends:

• Image provider local (local file system via Bioformats)
• Omero image server (image-provider-omero)

Scaleout via

• Spark scaleout (map-reduce-exec-spark)

Use gradle to build

Generic jar:

gradle jar
java -Djavax.xml.parsers.DocumentBuilderFactory=com.sun.org.apache.xerces.internal.jaxp.DocumentBuilderFactoryImpl -cp "build/libs/orbit-image-analysis.jar;build/libs/lib/*" com.actelion.research.orbit.imageAnalysis.components.OrbitImageAnalysis

License: GPLv3

Website: http://www.orbit.bio