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Introduction: what is hclust?

hclust is a pure-Python module for performing agglomerative (bottom up) hierarchical clustering, employing any of complete linkage clustering, single-linkage clustering, or mean linkage clustering. See the User's guide for more details.

Prerequisites

hclust has been tested with Python versions 2.6 and 2.7.

Installing

The source distribution for the most recent version can be obtained from the hclust project page by clicking on the Download ZIP button. The module can be installed with:

> python setup.py install

Since hclust is a work in progress, it's recommended to have the most recent version of the code.

How to use it?

hclust is a regular Python module: you import and invoke it from your own code. For a detailed usage guide and links to examples, please consult the user's guide.

License

Copyright (c) 2013 Michael Strosaker. See the LICENSE file for license rights and limitations (MIT).

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Agglomerative hierarchical clustering for Python

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