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Incorrect affected protein reference sequence shown #33

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ptaschner opened this issue Dec 8, 2023 · 1 comment
Open

Incorrect affected protein reference sequence shown #33

ptaschner opened this issue Dec 8, 2023 · 1 comment
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@ptaschner
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A bug in Mutalyzer's Normalizer results in display of an incorrect affected protein reference sequence (see https://mutalyzer.nl/normalizer/NC_006585.3(XM_014111995.2):c.462_463inv).
The affected protein description, NC_006585.3(XP_013967470.1):p.(Glu154_Val2844delinsAsp) is correct, but the affected protein reference sequence below it seems truncated lacking most of the deleted amino acids and displaying the * not at the end of the original XP_013967470.1 protein sequence.

@jfjlaros
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jfjlaros commented Jan 3, 2024

The following may also be a result of this bug:

NC_000011.10(NM_003002.4):c.4G>T is correctly translated to NC_000011.10(NP_002993.1):p.(Ala2Ser), but the visualisation does not reflect this protein description, it is about 88 amino acids off.

@jfjlaros jfjlaros added the bug Something isn't working label Jan 3, 2024
@mihailefter mihailefter self-assigned this Jan 16, 2024
mihailefter added a commit that referenced this issue Jan 16, 2024
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