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Increase errorbar flexibility #2407

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merged 14 commits into from Jan 2, 2021
Merged

Increase errorbar flexibility #2407

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290c703
Add EstimateAggregator and related functions
mwaskom Dec 29, 2020
03fb40c
Add tests for EstimateAggregator object
mwaskom Dec 29, 2020
9096600
Rework lineplot to use new aggregator object
mwaskom Dec 29, 2020
0421060
Test warning/redirection of old ci= arg
mwaskom Dec 29, 2020
90576a2
Update errorbar param in lineplot docs and tutorial
mwaskom Dec 29, 2020
0e56b12
Add errorbar param to lineplot docstring
mwaskom Dec 29, 2020
b14213d
Remove now-unused lineplot-specific aggregation method
mwaskom Dec 29, 2020
79e9797
Add release notes stub
mwaskom Dec 29, 2020
9c5a5d7
Add text for tutorial chapter on error bars
mwaskom Dec 30, 2020
f05e08d
Fix lineplot on log scaled axis
mwaskom Dec 30, 2020
e0b27d2
Let log_scaled default to False for unattached plotters
mwaskom Dec 31, 2020
b6e8e35
Handle named functions and nans better in bootstrap function
mwaskom Dec 31, 2020
bd83758
Generalize ci deprecation and increase docstring salience
mwaskom Dec 31, 2020
e98f5f7
Simplify code
mwaskom Dec 31, 2020
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4 changes: 2 additions & 2 deletions doc/docstrings/lineplot.ipynb
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Expand Up @@ -222,7 +222,7 @@
"cell_type": "raw",
"metadata": {},
"source": [
"Show error bars instead of error bands and plot the 68% confidence interval (standard error):"
"Show error bars instead of error bands and extend them to two standard error widths:"
]
},
{
Expand All @@ -232,7 +232,7 @@
"outputs": [],
"source": [
"sns.lineplot(\n",
" data=fmri, x=\"timepoint\", y=\"signal\", hue=\"event\", err_style=\"bars\", ci=68\n",
" data=fmri, x=\"timepoint\", y=\"signal\", hue=\"event\", err_style=\"bars\", errorbar=(\"se\", 2),\n",
")"
]
},
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2 changes: 2 additions & 0 deletions doc/releases/v0.12.0.txt
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Expand Up @@ -2,6 +2,8 @@
v0.12.0 (Unreleased)
--------------------

- |API| |Feature| |Enhancement| TODO (Flesh this out further). Increased flexibility of what can be shown by the internally-calculated errorbars (:pr:2407).

- Made `scipy` an optional dependency and added `pip install seaborn[all]` as a method for ensuring the availability of compatible `scipy` and `statsmodels` libraries. This has a few minor implications for existing code, which are explained in the Github pull request (:pr:`2398`).

- Following `NEP29 <https://numpy.org/neps/nep-0029-deprecation_policy.html>`_, dropped support for Python 3.6 and bumped the minimally-supported versions of the library dependencies.
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19 changes: 19 additions & 0 deletions doc/tutorial.rst
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Expand Up @@ -47,6 +47,25 @@ User guide and tutorial

tutorial/data_structure

.. raw:: html

</div>
</div>
</div>
<div class="row">
<div class="col-md-6">
<div class="col-md-4">
<a href=./tutorial/error_bars.html>
<img src="_images/error_bars_4_0.png" class="img-responsive center-block">
</a>
</div>
<div class="col-md-8">

.. toctree::
:maxdepth: 2

tutorial/error_bars

.. raw:: html

</div>
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