Reduce number of nodes required to get a fit

LCA Reducer [OPTIONS]

Common flags:
     --maxfits=NUM          Number of impact factors
     --datafile=FILE        Data file
     --nnlspath=DIR         NNLS library path
     --rscriptpath=FILE     Rscript path
     --rootnode=INT         Root node
     --delta=DOUBLE         Allowable fit error
     --mustinclude=FILE     Must include nodes
     --mustincludecat=FILE  Must include categories
     --numrandomnodes=INT   Number of extra random nodes to include
     --namesfile=FILE       Node names file
  -f --fitmeasure           Use fits to measure closeness
     --distmeasure          Use distance to measure closeness
  -k --knownchildren=ITEM   Known children
     --runs=INT             Number of runs
  -s --samples=INT          Number of samples
  -i --interactive          Enable to choose element from irreducible
  -b --bestfirst            Run best first
     --mine                 Run mine
     --reducennls           Just reduce the positive nodes that nnls outputs
  -? --help                 Display help message
  -V --version              Print version information

http://github.com/nanonaren/Reducer