plot_dtu_res error

[rebeelouise]

All good til the last moment...

Does anyone have any experience as to what is throwing this error?

Config file looks fine...

`Error in rule plot_dtu_res:
jobid: 26
output: de_analysis/dtu_plots.pdf
shell:

home/pipeline-transcriptome-de/scripts/plot_dtu_results.R

    (one of the commands exited with non-zero exit code; note that snakemake uses bash strict mode!)

Shutting down, this might take some time.
Exiting because a job execution failed. Look above for error message`

[bsipos]

Hello! Could you please include the command line you have run and more details from the error message?

[sagrudd]

@bsipos - I have been able to replicate this issue and have a fix; I'll create a PR later today for this - final testing now