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I was wondering if you had a dataset listing all the neurons belonging to each cluster/supercluster from online in your nblast R package, or whether this information is only accessible on the website. Thanks very much!
Just a quick question: I noticed I get different flycircuit ids when I do the following: fc_idid(apdf$item[(apdf$cluster == 1)])
versus apdf$idx[(apdf$cluster == 1)]
Did I perhaps miss something? Looks like the ids for the first half of the list are correct, but begin to diverge afterward. Thanks so much for your help!
The first form using fcidid is correct. The other id is not a flycircuit id but a sequential number generated in the clustering. In general I recommend referring to neurons using the character identifiers to avoid such ambiguities.
I was wondering if you had a dataset listing all the neurons belonging to each cluster/supercluster from online in your nblast R package, or whether this information is only accessible on the website. Thanks very much!
edit: Just found https://github.com/jefferislab/NBLAST_clusters_online --thanks!
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