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natverse · Feb 7, 2020 · b080859 · b080859
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: nat
 Type: Package
 Title: NeuroAnatomy Toolbox for Analysis of 3D Image Data
-Version: 1.9.2
+Version: 1.9.2.9000
 Authors@R: c(
     person("Gregory","Jefferis", email="jefferis@gmail.com", 
     role = c("aut", "cre"), comment = c(ORCID = "0000-0002-0587-9355")),

diff --git a/_pkgdown.yml b/_pkgdown.yml
@@ -80,7 +80,6 @@ reference:
     - scale.neuron
     - resample
     - smooth_neuron
-    - potential_synapses
     - normalise_swc
   - title: Neurons (as graphs)
     desc: Functions for working with the graph structure of neurons
@@ -172,6 +171,10 @@ reference:
     contents:
     - nvertices
     - xyzmatrix
+    - potential_synapses
+    - overlap
+    - overlap_score
+    - sholl_analysis
     - plane_coefficients
     - intersect_plane
   - title: Object transformation

diff --git a/docs/404.html b/docs/404.html
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diff --git a/docs/articles/NeuroGeometry.html b/docs/articles/NeuroGeometry.html
diff --git a/docs/articles/index.html b/docs/articles/index.html
diff --git a/docs/articles/neurons-as-graph.html b/docs/articles/neurons-as-graph.html
diff --git a/docs/articles/neurons-as-graph_files/figure-html/unnamed-chunk-5-1.png b/docs/articles/neurons-as-graph_files/figure-html/unnamed-chunk-5-1.png
diff --git a/docs/articles/neurons-intro.html b/docs/articles/neurons-intro.html
diff --git a/docs/articles/plotly.html b/docs/articles/plotly.html
diff --git a/docs/authors.html b/docs/authors.html
diff --git a/docs/index.html b/docs/index.html
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diff --git a/docs/reference/Cell07PNs.html b/docs/reference/Cell07PNs.html
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diff --git a/docs/reference/all.equal.im3d.html b/docs/reference/all.equal.im3d.html
diff --git a/docs/reference/all.equal.neuron.html b/docs/reference/all.equal.neuron.html
diff --git a/docs/reference/amiramesh-io.html b/docs/reference/amiramesh-io.html
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diff --git a/docs/reference/as.neuronlist.html b/docs/reference/as.neuronlist.html
diff --git a/docs/reference/as.neuronlist.neuronlistfh.html b/docs/reference/as.neuronlist.neuronlistfh.html