Fix grepl for ROIs #3
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…m contain brackets.
jefferis
reviewed
Nov 20, 2019
| @@ -203,7 +203,7 @@ extract_connectivity_df <- function(rois, json){ | |||
| a = unlist(strsplit(json,"}")) | |||
| values = data.frame() | |||
| for(roi in rois){ | |||
| b = a[grepl(sprintf("\"%s\"",roi),a)] | |||
| b = a[grepl(sprintf("\"%s\"",roi),a,fixed=TRUE)] | |||
| if(length(b)){ | |||
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Looks good to me @romainFr. @alexanderbates?
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Switch to grepl with fixed=TRUE when matching ROI names as some of the ROI names contain brackets. This was causing neuprint_find_neurons to return connections all equal to 0 when the ROI name contained a parenthesis.