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37 Open 22 Closed
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Issues list

IDR cannot be launched after install
#68 opened Jul 18, 2024 by callum-b
idr/archive/2.0.2.zip not in accordance with the master branch
#67 opened May 2, 2024 by axol0tl
--input-file-type bed expecting 9 columns
#65 opened Jan 11, 2023 by perinom
1
AttributeError: module 'numpy' has no attribute 'int'
#64 opened Dec 21, 2022 by narzouni
2
Irreproducible Discovery Rate (IDR) for 3 replicates
#63 opened Nov 30, 2022 by lipc20052006
3
idr:idr has no attribute 'fit_model_and_calc_local_idr'
#62 opened Aug 16, 2022 by SomaG-PSN
IDR-pooled peak list
#61 opened Apr 29, 2022 by Erfan1369
Parameter requirements for input file in BED format?
#59 opened Oct 12, 2021 by ydy1127
pkg_resources.DistributionNotFound
#58 opened Sep 6, 2021 by Li-ZhiD
idr --samples peak1 peak2 : Number of peaks passing IDR cutoff of 0.05 - 0/50537 (0.0%)
#56 opened Mar 20, 2021 by AndHerr
1
idr excludes top peaks
#55 opened Feb 18, 2021 by natashaklmnk
1
ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all()
#54 opened Dec 5, 2020 by hcph
5
Error running with bed file
#53 opened Dec 3, 2020 by celinasjose
IDR with small number of peaks
#52 opened Sep 30, 2020 by peaceben
Can I use IDR to analyze ChIPseq or Cuttag data of histones?
#51 opened Jul 2, 2020 by AIBio
what the columns when the inputs are bed files?
#50 opened Apr 17, 2020 by olechnwin
1
bug found?
#49 opened Mar 11, 2020 by olechnwin
1
ValueError: could not convert string to float
#48 opened Mar 3, 2020 by IzabelaIbraim
Order of Peak1 vs. Peak2 after --samples
#47 opened Nov 27, 2019 by singing-scientist
1
Empty merged picks list
#46 opened Nov 14, 2019 by amitjavilaventura
2
Version mismatch between code and documentation (README.md)
#45 opened Mar 18, 2019 by balwierz
score does not correspond with IDR
#43 opened Jan 23, 2019 by mistrm82
1
Fold enrichment value when running IDR with pvalue rank
#42 opened Dec 6, 2018 by msantorsola
IndexError: list index out of range
#41 opened Oct 5, 2018 by aparnasing
7
idr error with narrowPeaks
#39 opened Jul 5, 2018 by wisense
2
ProTip! Follow long discussions with comments:>50.