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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,8 +1,8 @@ | ||
| #target_contig stx_type operon identity target_start target_stop target_strand A_reference A_identity A_coverage B_reference B_identity B_coverage | ||
| partial stx2 PARTIAL 99.41 27 1048 + AAA16362.1 99.19 77.19 AAS07607.1 100.00 100.00 | ||
| partial_contig_end stx2 PARTIAL_CONTIG_END 100.00 3 661 - AAA16362.1 100.00 58.44 AAM70046.1 100.00 32.22 | ||
| stx1a stx1a COMPLETE 100.00 218 1444 + AAA98347.1 100.00 100.00 AAA71894.1 100.00 100.00 | ||
| stx2_fs stx2 FRAMESHIFT 99.15 2165 3232 + AAG01033.1 98.87 82.19 AAA16363.1 100.00 100.00 | ||
| stx2_novel stx2 COMPLETE_NOVEL 99.76 216 1456 + AAA19623.1 99.69 100.00 AAA16363.1 100.00 100.00 | ||
| stx2_stop stx2 INTERNAL_STOP 694 1653 + AUM09788.1 91.25 100.00 | ||
| stx2c stx2c COMPLETE 100.00 1298 2538 - AAS07596.1 100.00 100.00 AAA16363.1 100.00 100.00 | ||
| #target_contig stx_type operon identity target_start target_stop target_strand A_reference A_reference_subtype A_identity A_coverage B_reference B_reference_subtype B_identity B_coverage | ||
| partial stx2 PARTIAL 99.41 27 1048 + AAA16362.1 stxA2c 99.19 77.19 AAS07607.1 stxB2a 100.00 100.00 | ||
| partial_contig_end stx2 PARTIAL_CONTIG_END 100.00 3 661 - AAA16362.1 stxA2c 100.00 58.44 AAM70046.1 stxB2a 100.00 32.22 | ||
| stx1a stx1a COMPLETE 100.00 218 1444 + AAA98347.1 stxA1a 100.00 100.00 AAA71894.1 stxB1a 100.00 100.00 | ||
| stx2_fs stx2 FRAMESHIFT 99.15 2165 3232 + AAG01033.1 stxA2c 98.87 82.19 AAA16363.1 stxB2c 100.00 100.00 | ||
| stx2_novel stx2 COMPLETE_NOVEL 99.76 216 1456 + AAA19623.1 stxA2 99.69 100.00 AAA16363.1 stxB2c 100.00 100.00 | ||
| stx2_stop stx2 INTERNAL_STOP 694 1653 + AUM09788.1 stxA2h 91.25 100.00 | ||
| stx2c stx2c COMPLETE 100.00 1298 2538 - AAS07596.1 stxA2 100.00 100.00 AAA16363.1 stxB2c 100.00 100.00 |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,6 +1,6 @@ | ||
| #target_contig stx_type operon identity target_start target_stop target_strand A_reference A_identity A_coverage B_reference B_identity B_coverage | ||
| A2l_a2e_equidistant stx2l COMPLETE 99.02 14780 16020 + CAP17609.1 98.75 100.00 CAP17610.1 100.00 100.00 | ||
| PD-4797_multirow stx1 PARTIAL 100.00 1625 2852 - AAA98347.1 100.00 100.00 AAA71894.1 100.00 86.67 | ||
| PD-4897_multirow_contig_end stx2 PARTIAL_CONTIG_END 11 274 + AAA16361.1 100.00 100.00 | ||
| PD-4898_A2a_B2l stx2a COMPLETE 100.00 718 1958 + QZL10984.1 100.00 100.00 QZL10985.1 100.00 100.00 | ||
| stx2d_better_stxB2k stx2d COMPLETE 100.00 3 1243 + AAM22256.1 100.00 100.00 MCW3229578.1 100.00 100.00 | ||
| #target_contig stx_type operon identity target_start target_stop target_strand A_reference A_reference_subtype A_identity A_coverage B_reference B_reference_subtype B_identity B_coverage | ||
| A2l_a2e_equidistant stx2l COMPLETE 99.02 14780 16020 + CAP17609.1 stxA2l 98.75 100.00 CAP17610.1 stxB2 100.00 100.00 | ||
| PD-4797_multirow stx1 PARTIAL 100.00 1625 2852 - AAA98347.1 stxA1a 100.00 100.00 AAA71894.1 stxB1a 100.00 86.67 | ||
| PD-4897_multirow_contig_end stx2 PARTIAL_CONTIG_END 11 274 + AAA16361.1 stxB2b 100.00 100.00 | ||
| PD-4898_A2a_B2l stx2a COMPLETE 100.00 718 1958 + QZL10984.1 stxA2a 100.00 100.00 QZL10985.1 stxB2 100.00 100.00 | ||
| stx2d_better_stxB2k stx2d COMPLETE 100.00 3 1243 + AAM22256.1 stxA2 100.00 100.00 MCW3229578.1 stxB2d 100.00 100.00 |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,30 +1,30 @@ | ||
| #target_contig stx_type operon identity target_start target_stop target_strand A_reference A_identity A_coverage B_reference B_identity B_coverage | ||
| 1_intergenic_variation1 stx2m COMPLETE 100.00 1 1242 + EET7735230.1 100.00 100.00 EET7735231.1 100.00 100.00 | ||
| 1_intergenic_variation2 stx2m COMPLETE 99.76 1 1239 + EET7735230.1 99.69 100.00 EET7735231.1 100.00 100.00 | ||
| 2_length_variation_earlystopA2m stx2 INTERNAL_STOP 99.75 1 1236 + EET7735230.1 99.69 100.00 EET7735231.1 100.00 100.00 | ||
| 2_length_variation_earlystopB2c stx2 INTERNAL_STOP 99.76 1 1241 + AAA19623.1 100.00 100.00 AAA16363.1 98.89 100.00 | ||
| 2_length_variation_extendedA2n stx2 EXTENDED 100.00 1 1236 + WAK53220.1 100.00 99.68 WAK53219.1 100.00 100.00 | ||
| 2_length_variation_normal2c stx2c COMPLETE 100.00 1 1241 + AAA19623.1 100.00 100.00 AAA16363.1 100.00 100.00 | ||
| 2_length_variation_normal2m stx2m COMPLETE 100.00 1 1236 + EET7735230.1 100.00 100.00 EET7735231.1 100.00 100.00 | ||
| 2_length_variation_normal2n stx2n COMPLETE 100.00 1 1236 + WAK53220.1 100.00 100.00 WAK53219.1 100.00 100.00 | ||
| 2_length_variation_truncatedA2m stx2 PARTIAL 100.00 1 1224 + EET7735230.1 100.00 97.81 EET7735231.1 100.00 100.00 | ||
| 2_length_variation_truncatedB2c stx2 PARTIAL_CONTIG_END 100.00 1 1235 + AAA19623.1 100.00 100.00 AAA16363.1 100.00 97.78 | ||
| 3_diagnostic_sites_2c_in_2a_background stx2c COMPLETE 99.76 1 1241 + AAS07600.1 100.00 100.00 AAA16363.1 98.89 100.00 | ||
| 3_diagnostic_sites_2d_in_2a_background stx2d COMPLETE 99.51 1 1241 + AAM22256.1 99.69 100.00 AAA16363.1 98.89 100.00 | ||
| 3_diagnostic_sites_normal2a stx2a COMPLETE 100.00 1 1241 + AAS07600.1 100.00 100.00 AAM90978.1 100.00 100.00 | ||
| 4_mutations_2A_K319F stx2 PARTIAL 99.75 1 1241 + AAS07600.1 100.00 99.38 AAA16363.1 98.89 100.00 | ||
| 4_mutations_2A_K319L stx2 PARTIAL 99.75 1 1241 + AAS07600.1 100.00 99.38 AAA16363.1 98.89 100.00 | ||
| 4_mutations_2A_K319N stx2 COMPLETE_NOVEL 99.51 1 1241 + AAS07600.1 99.69 100.00 AAA16363.1 98.89 100.00 | ||
| 4_mutations_2A_K319Q stx2 COMPLETE_NOVEL 99.51 1 1241 + AAS07600.1 99.69 100.00 AAA16363.1 98.89 100.00 | ||
| 4_mutations_normal_2a stx2c COMPLETE 99.76 1 1241 + AAS07600.1 100.00 100.00 AAA16363.1 98.89 100.00 | ||
| 5_frame_shift_real stx1 FRAMESHIFT 100.00 301 1528 - AAA98347.1 100.00 100.00 AAA71894.1 100.00 100.00 | ||
| 5_frame_shift_stx2b_terminalA stx2 EXTENDED 100.00 1 1237 + BAB83004.1 100.00 99.69 AAA16361.1 100.00 100.00 | ||
| 5_frame_shift_stx2b_terminalB stx2 EXTENDED 100.00 1 1233 + BAB83004.1 100.00 100.00 AAA16361.1 100.00 98.86 | ||
| 5_frame_shift_stx2k_shortenB stx2 PARTIAL 100.00 1 1229 + AGB13719.2 100.00 100.00 AGB13720.2 100.00 95.56 | ||
| 5_frame_shift_stx2n_terminalA stx2 PARTIAL 100.00 1 1237 + WAK53220.1 100.00 99.36 WAK53219.1 100.00 100.00 | ||
| 5_frame_shift_stx2n_terminalA_v2 stx2 EXTENDED 100.00 1 1237 + WAK53220.1 100.00 99.68 WAK53219.1 100.00 100.00 | ||
| 5_mutations_above_cutoff_1c stx1 COMPLETE_NOVEL 97.04 1 1228 + BAB83022.1 96.20 100.00 BAB83023.1 100.00 100.00 | ||
| 5_mutations_above_cutoff_2k stx2 COMPLETE_NOVEL 96.59 1 1241 + AGB13719.2 97.19 100.00 AAY63865.1 94.44 100.00 | ||
| 7_mixed_stx1_stx2_A1aB2a stx COMPLETE_NOVEL 99.75 1 1230 + AAA71893.1 100.00 100.00 AAA16363.1 98.89 100.00 | ||
| 7_mixed_stx1_stx2_A2cB1a stx COMPLETE_NOVEL 100.00 1 1230 + ABR09934.1 100.00 100.00 AAA71894.1 100.00 100.00 | ||
| stx1a_frameshift stx1 FRAMESHIFT 100.00 301 1528 - AAA98347.1 100.00 100.00 AAA71894.1 100.00 100.00 | ||
| #target_contig stx_type operon identity target_start target_stop target_strand A_reference A_reference_subtype A_identity A_coverage B_reference B_reference_subtype B_identity B_coverage | ||
| 1_intergenic_variation1 stx2m COMPLETE 100.00 1 1242 + EET7735230.1 stxA2m 100.00 100.00 EET7735231.1 stxB2m 100.00 100.00 | ||
| 1_intergenic_variation2 stx2m COMPLETE 99.76 1 1239 + EET7735230.1 stxA2m 99.69 100.00 EET7735231.1 stxB2m 100.00 100.00 | ||
| 2_length_variation_earlystopA2m stx2 INTERNAL_STOP 99.75 1 1236 + EET7735230.1 stxA2m 99.69 100.00 EET7735231.1 stxB2m 100.00 100.00 | ||
| 2_length_variation_earlystopB2c stx2 INTERNAL_STOP 99.76 1 1241 + AAA19623.1 stxA2 100.00 100.00 AAA16363.1 stxB2c 98.89 100.00 | ||
| 2_length_variation_extendedA2n stx2 EXTENDED 100.00 1 1236 + WAK53220.1 stxA2n 100.00 99.68 WAK53219.1 stxB2n 100.00 100.00 | ||
| 2_length_variation_normal2c stx2c COMPLETE 100.00 1 1241 + AAA19623.1 stxA2 100.00 100.00 AAA16363.1 stxB2c 100.00 100.00 | ||
| 2_length_variation_normal2m stx2m COMPLETE 100.00 1 1236 + EET7735230.1 stxA2m 100.00 100.00 EET7735231.1 stxB2m 100.00 100.00 | ||
| 2_length_variation_normal2n stx2n COMPLETE 100.00 1 1236 + WAK53220.1 stxA2n 100.00 100.00 WAK53219.1 stxB2n 100.00 100.00 | ||
| 2_length_variation_truncatedA2m stx2 PARTIAL 100.00 1 1224 + EET7735230.1 stxA2m 100.00 97.81 EET7735231.1 stxB2m 100.00 100.00 | ||
| 2_length_variation_truncatedB2c stx2 PARTIAL_CONTIG_END 100.00 1 1235 + AAA19623.1 stxA2 100.00 100.00 AAA16363.1 stxB2c 100.00 97.78 | ||
| 3_diagnostic_sites_2c_in_2a_background stx2c COMPLETE 99.76 1 1241 + AAS07600.1 stxA2 100.00 100.00 AAA16363.1 stxB2c 98.89 100.00 | ||
| 3_diagnostic_sites_2d_in_2a_background stx2d COMPLETE 99.51 1 1241 + AAM22256.1 stxA2 99.69 100.00 AAA16363.1 stxB2c 98.89 100.00 | ||
| 3_diagnostic_sites_normal2a stx2a COMPLETE 100.00 1 1241 + AAS07600.1 stxA2 100.00 100.00 AAM90978.1 stxB2a 100.00 100.00 | ||
| 4_mutations_2A_K319F stx2 PARTIAL 99.75 1 1241 + AAS07600.1 stxA2 100.00 99.38 AAA16363.1 stxB2c 98.89 100.00 | ||
| 4_mutations_2A_K319L stx2 PARTIAL 99.75 1 1241 + AAS07600.1 stxA2 100.00 99.38 AAA16363.1 stxB2c 98.89 100.00 | ||
| 4_mutations_2A_K319N stx2 COMPLETE_NOVEL 99.51 1 1241 + AAS07600.1 stxA2 99.69 100.00 AAA16363.1 stxB2c 98.89 100.00 | ||
| 4_mutations_2A_K319Q stx2 COMPLETE_NOVEL 99.51 1 1241 + AAS07600.1 stxA2 99.69 100.00 AAA16363.1 stxB2c 98.89 100.00 | ||
| 4_mutations_normal_2a stx2c COMPLETE 99.76 1 1241 + AAS07600.1 stxA2 100.00 100.00 AAA16363.1 stxB2c 98.89 100.00 | ||
| 5_frame_shift_real stx1 FRAMESHIFT 100.00 301 1528 - AAA98347.1 stxA1a 100.00 100.00 AAA71894.1 stxB1a 100.00 100.00 | ||
| 5_frame_shift_stx2b_terminalA stx2 EXTENDED 100.00 1 1237 + BAB83004.1 stxA2b 100.00 99.69 AAA16361.1 stxB2b 100.00 100.00 | ||
| 5_frame_shift_stx2b_terminalB stx2 EXTENDED 100.00 1 1233 + BAB83004.1 stxA2b 100.00 100.00 AAA16361.1 stxB2b 100.00 98.86 | ||
| 5_frame_shift_stx2k_shortenB stx2 PARTIAL 100.00 1 1229 + AGB13719.2 stxA2k 100.00 100.00 AGB13720.2 stxB2 100.00 95.56 | ||
| 5_frame_shift_stx2n_terminalA stx2 PARTIAL 100.00 1 1237 + WAK53220.1 stxA2n 100.00 99.36 WAK53219.1 stxB2n 100.00 100.00 | ||
| 5_frame_shift_stx2n_terminalA_v2 stx2 EXTENDED 100.00 1 1237 + WAK53220.1 stxA2n 100.00 99.68 WAK53219.1 stxB2n 100.00 100.00 | ||
| 5_mutations_above_cutoff_1c stx1 COMPLETE_NOVEL 97.04 1 1228 + BAB83022.1 stxA1c 96.20 100.00 BAB83023.1 stxB1c 100.00 100.00 | ||
| 5_mutations_above_cutoff_2k stx2 COMPLETE_NOVEL 96.59 1 1241 + AGB13719.2 stxA2k 97.19 100.00 AAY63865.1 stxB2 94.44 100.00 | ||
| 7_mixed_stx1_stx2_A1aB2a stx COMPLETE_NOVEL 99.75 1 1230 + AAA71893.1 stxA1a 100.00 100.00 AAA16363.1 stxB2c 98.89 100.00 | ||
| 7_mixed_stx1_stx2_A2cB1a stx COMPLETE_NOVEL 100.00 1 1230 + ABR09934.1 stxA2 100.00 100.00 AAA71894.1 stxB1a 100.00 100.00 | ||
| stx1a_frameshift stx1 FRAMESHIFT 100.00 301 1528 - AAA98347.1 stxA1a 100.00 100.00 AAA71894.1 stxB1a 100.00 100.00 |
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