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Merge pull request #10 from neicnordic/docs/update-nbis-links
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correct information regarding NBISweden repos
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blankdots committed Sep 30, 2021
2 parents 7f6dbf4 + b94c3c6 commit dd79446
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -15,7 +15,7 @@ Source code for core components (unless specified otherwise) is available at: ht

| Component | Role |
|---------------|------|
| inbox | SFTP, S3 or HTTPS server, acting as a dropbox, where user credentials are fetched from CentralEGA or via ELIXIR AAI. https://github.com/NBISweden/sda-s3proxy/ or https://github.com/neicnordic/sda-inbox-sftp |
| inbox | SFTP, S3 or HTTPS server, acting as a dropbox, where user credentials are fetched from CentralEGA or via ELIXIR AAI. https://github.com/neicnordic/sda-s3proxy/ or https://github.com/neicnordic/sda-inbox-sftp |
| intercept | The intercept service relays message between the queue provided from the federated service and local queues. **(Required for Federated EGA use case)** |
| ingest | Split the Crypt4GH header and move the remainder to the storage backend. No cryptographic task, nor access to the decryption keys. |
| verify | Decrypt the stored files and checksum them against their embedded checksum. |
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2 changes: 1 addition & 1 deletion docs/submission.rst
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Expand Up @@ -163,7 +163,7 @@ S3 Proxy Inbox

The S3 Proxy uses access tokens as the main authentication mechanism.

The sda authentication service (https://github.com/NBISweden/sda-auth) is designed to convert
The sda authentication service (https://github.com/neicnordic/sda-auth) is designed to convert
CEGA REST endpoint authentication to a JWT that can be used when uploading to the S3 proxy.

The proxy requires the user to set the bucket name the same as the username when uploading data,
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6 changes: 4 additions & 2 deletions docs/tests.rst
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Expand Up @@ -7,9 +7,11 @@ We have implemented 2 types of testsuite:
- one set of *integration tests* to test the overall architecture.

The latter does actually deploy a chosen setup and runs several scenarios, users
will utilize the system as a whole, .
will utilize the system as a whole.

.. note:: Unit tests and integration tests are automatically executed
with every push and PR to the ``NBIS Github repo``.
with every push and PR to the ``NeIC Github repo`` via Github Actions.


In order to replicate integration tests on a local machine see:
`sda-pipeline Local testing howto <https://github.com/neicnordic/sda-pipeline/tree/master/dev_utils#readme>`_

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