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Fix requirements and cors origins for nest-server (#225)
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babsey committed Apr 4, 2024
1 parent 972571d commit 15fd9ce
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Showing 4 changed files with 18 additions and 17 deletions.
2 changes: 1 addition & 1 deletion src/3.6/entrypoint.sh
Original file line number Diff line number Diff line change
Expand Up @@ -39,7 +39,7 @@ elif [[ "${MODE}" = 'nest-server' ]]; then
export NEST_SERVER_STDOUT="${NEST_SERVER_STDOUT:-1}"

export NEST_SERVER_ACCESS_TOKEN="${NEST_SERVER_ACCESS_TOKEN}"
export NEST_SERVER_CORS_ORIGINS="${NEST_SERVER_CORS_ORIGINS:-http://localhost:*}"
export NEST_SERVER_CORS_ORIGINS="${NEST_SERVER_CORS_ORIGINS:-*}"
export NEST_SERVER_DISABLE_AUTH="${NEST_SERVER_DISABLE_AUTH:-1}"
export NEST_SERVER_DISABLE_RESTRICTION="${NEST_SERVER_DISABLE_RESTRICTION:-1}"
export NEST_SERVER_ENABLE_EXEC_CALL="${NEST_SERVER_ENABLE_EXEC_CALL:-1}"
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10 changes: 5 additions & 5 deletions src/3.7rc1/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@ ENV TERM=xterm \
RUN apt-get update && apt-get install -y --no-install-recommends \
automake \
autotools-dev \
build-essential \
build-essential \
ccache \
cmake \
curl \
Expand All @@ -42,7 +42,7 @@ RUN apt-get update && apt-get install -y --no-install-recommends \
libpcre3-dev \
libpython3.10 \
libreadline-dev \
libreadline8 \
libreadline8 \
libtool \
libzmq3-dev \
llvm-dev \
Expand All @@ -64,12 +64,12 @@ RUN apt-get update && apt-get install -y --no-install-recommends \
python3-mpi4py \
python3-nose \
python3-numpy \
python3-pandas \
python3-pandas \
python3-path \
python3-pip \
python3-pytest \
python3-pytest-timeout \
python3-pytest-xdist \
python3-pytest-xdist \
python3-restrictedpython \
python3-scipy \
python3-setuptools \
Expand Down Expand Up @@ -109,7 +109,7 @@ RUN apt-get update && apt-get install -y --no-install-recommends \
-Dwith-openmp=ON \
-Dwith-libneurosim=OFF \
-Dwith-sionlib=OFF \
-Dwith-music='$HOME/.cache/libneurosim.install' \
-Dwith-music='$HOME/.cache/libneurosim.install' \
-Dwith-hdf5=ON \
${SRC_PATH}/nest-simulator-${NEST_VERSION} && \
make && \
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21 changes: 11 additions & 10 deletions src/dev/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@ ENV TERM=xterm \
RUN apt-get update && apt-get install -y --no-install-recommends \
automake \
autotools-dev \
build-essential \
build-essential \
ccache \
cmake \
curl \
Expand All @@ -41,7 +41,7 @@ RUN apt-get update && apt-get install -y --no-install-recommends \
libpcre3-dev \
libpython3.10 \
libreadline-dev \
libreadline8 \
libreadline8 \
libtool \
libzmq3-dev \
llvm-dev \
Expand All @@ -63,12 +63,12 @@ RUN apt-get update && apt-get install -y --no-install-recommends \
python3-mpi4py \
python3-nose \
python3-numpy \
python3-pandas \
python3-pandas \
python3-path \
python3-pip \
python3-pytest \
python3-pytest-timeout \
python3-pytest-xdist \
python3-pytest-xdist \
python3-restrictedpython \
python3-scipy \
python3-setuptools \
Expand All @@ -86,7 +86,7 @@ RUN apt-get update && apt-get install -y --no-install-recommends \
apt-get autoremove

RUN python3 -m pip install --upgrade pip setuptools wheel mock
RUN python3 -m pip install --force-reinstall --upgrade --no-binary=h5py h5py
RUN python3 -m pip install --force-reinstall --upgrade --no-binary=h5py h5py
RUN ldconfig


Expand All @@ -101,7 +101,7 @@ RUN python3 -m pip install -r ${SRC_PATH}/nest-simulator-${NEST_VERSION}/doc/req
RUN chmod +x ${SRC_PATH}/nest-simulator-${NEST_VERSION}/build_support/install_music.sh && \
${SRC_PATH}/nest-simulator-${NEST_VERSION}/build_support/install_music.sh

# # Install libneurosim
# # Install libneurosim
# RUN cd ${SRC_PATH}/nest-simulator-${NEST_VERSION} && \
# PYLIB_DIR="$(python3 -c "import sysconfig; print(sysconfig.get_path('include'))" | sed 's/include/lib/')" && \
# chmod +x ${SRC_PATH}/nest-simulator-${NEST_VERSION}/build_support/install_csa-libneurosim.sh && \
Expand All @@ -127,18 +127,19 @@ RUN mkdir ${SRC_PATH}/nest-build && cd $_ && \
-Dwith-openmp=ON \
-Dwith-libneurosim=OFF \
-Dwith-sionlib=OFF \
-Dwith-music=ON \
-Dwith-music=ON \
-Dwith-hdf5=ON \
${SRC_PATH}/nest-simulator-${NEST_VERSION} && \
make && \
make install

# Install NESTML and more
RUN python3 -m pip install --upgrade pip && \
python3 -m pip install -r ${SRC_PATH}/nest-simulator-${NEST_VERSION}/requirements.txt && \
python3 -m pip install nest-desktop --pre && \
python3 -m pip install -r ${SRC_PATH}/nest-simulator-${NEST_VERSION}/requirements_testing.txt && \
python3 -m pip install -r ${SRC_PATH}/nest-simulator-${NEST_VERSION}/requirements_nest_server.txt && \
python3 -m pip install nest-desktop && \
python3 -m pip uninstall nestml -y && \
python3 -m pip install --upgrade https://github.com/nest/nestml/archive/refs/heads/master.zip
python3 -m pip install --upgrade https://github.com/nest/nestml/archive/refs/heads/master.zip

RUN python3 -m pip install --force-reinstall --upgrade scipy

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2 changes: 1 addition & 1 deletion src/dev/entrypoint.sh
Original file line number Diff line number Diff line change
Expand Up @@ -39,7 +39,7 @@ elif [[ "${MODE}" = 'nest-server' ]]; then
export NEST_SERVER_STDOUT="${NEST_SERVER_STDOUT:-1}"

export NEST_SERVER_ACCESS_TOKEN="${NEST_SERVER_ACCESS_TOKEN}"
export NEST_SERVER_CORS_ORIGINS="${NEST_SERVER_CORS_ORIGINS:-http://localhost:*}"
export NEST_SERVER_CORS_ORIGINS="${NEST_SERVER_CORS_ORIGINS:-*}"
export NEST_SERVER_DISABLE_AUTH="${NEST_SERVER_DISABLE_AUTH:-1}"
export NEST_SERVER_DISABLE_RESTRICTION="${NEST_SERVER_DISABLE_RESTRICTION:-1}"
export NEST_SERVER_ENABLE_EXEC_CALL="${NEST_SERVER_ENABLE_EXEC_CALL:-1}"
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