Skip to content

netbofia/ensembl_sequence_getter

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

3 Commits
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Orthologous sequence ensembl getter

This is a custom built script to retreive sequence from Ensembl database.

Given the gene symbol to get a list of gene ids for human.

Then the gene ids are used to extract the orthologous sequences for all species on ensembl into a folder per gene.

Everything is hardcoded inthe perl script and no input is necessary.

for help please contact.

mailto:brunovasquescosta@gmail.com

About

A custom perl script to gather ortholous

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages