Pmid abstracts #176
Workflow file for this run
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| name: "build" | |
| on: | |
| push: | |
| branches: | |
| - "main" | |
| pull_request: | |
| branches: | |
| - "*" | |
| jobs: | |
| checks: | |
| name: checks | |
| runs-on: "ubuntu-latest" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.10" | |
| - name: "install" | |
| run: pip install .[dev] | |
| - name: "mypy" | |
| run: make test_mypy | |
| - name: "flake8" | |
| run: make test_flake8 | |
| run_tests: | |
| name: ${{ matrix.os }} with Python ${{ matrix.python-version }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: ["ubuntu-latest", "windows-latest", "macos-latest"] | |
| python-version: ["3.7", "3.10"] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| name: "setup python" | |
| - name: "install" | |
| run: pip install .[dev] | |
| - name: "run tests" | |
| run: make test_coverage | |
| - uses: codecov/codecov-action@v2 | |
| if: success() | |
| name: "upload coverage to CodeCov" | |
| run_tests_ubuntu_old_dependencies: | |
| name: "Ubuntu with Python 3.7 min dependencies" | |
| runs-on: "ubuntu-latest" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.7" | |
| name: "setup python" | |
| - name: "install tox" | |
| run: pip install tox | |
| - name: "run tests" | |
| run: tox -e py37-old | |
| run_tests_with_nimare_installed: | |
| name: "Ubuntu with Python 3.8 and NiMARE" | |
| runs-on: "ubuntu-latest" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.8" | |
| name: "setup python" | |
| - name: "install tox" | |
| run: pip install tox | |
| - name: "run tests" | |
| run: tox -e py38-nimare | |
| run_test_plugin: | |
| name: "Test plugin" | |
| runs-on: "ubuntu-latest" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.10" | |
| name: "setup python" | |
| - name: "install tox" | |
| run: pip install tox | |
| - name: "run tests" | |
| run: make test_plugin | |
| run_compare_query_vs_pmcid_list: | |
| name: "Compare query vs PMCID list" | |
| runs-on: "ubuntu-latest" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.10" | |
| name: "setup python" | |
| - name: "install" | |
| run: pip install .[dev] | |
| - name: "run check" | |
| run: make compare_query_vs_pmcid_list | |
| build_doc: | |
| name: "build documentation" | |
| runs-on: "ubuntu-latest" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.10" | |
| - name: "install" | |
| run: pip install .[dev] | |
| - name: "build" | |
| run: make doc | |
| - name: "store doc artifact" | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: documentation | |
| path: doc_build/pubget.html |