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[ENH] make nested queries faster #239

Merged
merged 42 commits into from
Mar 22, 2022
Merged

[ENH] make nested queries faster #239

merged 42 commits into from
Mar 22, 2022

Commits on Mar 3, 2022

  1. update to main branch

    @jdkent
    jdkent committed Mar 3, 2022
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  2. readd openapi as submodule

    @jdkent
    jdkent committed Mar 3, 2022
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  3. just use regular config files since they do not contain sensitive inf… 

    …ormation
    @jdkent
    jdkent committed Mar 3, 2022
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  4. skip config rename step

    @jdkent
    jdkent committed Mar 3, 2022
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  5. rename to neurosynth

    @jdkent
    jdkent committed Mar 3, 2022
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  6. modify both readmes

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    jdkent committed Mar 3, 2022
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  7. add top level readme

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    jdkent committed Mar 3, 2022
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Commits on Mar 4, 2022

  1. Merge branch 'master' of github.com:neurostuff/neurostore

    @jdkent
    jdkent committed Mar 4, 2022
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Commits on Mar 7, 2022

  1. Merge branch 'master' of github.com:neurostuff/neurostore

    @jdkent
    jdkent committed Mar 7, 2022
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Commits on Mar 9, 2022

  1. Merge branch 'master' of github.com:neurostuff/neurostore

    @jdkent
    jdkent committed Mar 9, 2022
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Commits on Mar 10, 2022

  1. Merge branch 'master' of github.com:neurostuff/neurostore

    @jdkent
    jdkent committed Mar 10, 2022
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  2. trying to use selectin to make embedded queries more efficient

    @jdkent
    jdkent committed Mar 10, 2022
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Commits on Mar 14, 2022

  1. tmp: optimize nested queries

    @jdkent
    jdkent committed Mar 14, 2022
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Commits on Mar 15, 2022

  1. bump sqlalchemy to 1.4+

    @jdkent
    jdkent committed Mar 15, 2022
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  2. eager load resources when calling nested

    @jdkent
    jdkent committed Mar 15, 2022
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  3. remove nonworking test

    @jdkent
    jdkent committed Mar 15, 2022
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  4. change postgres to postgresql

    @jdkent
    jdkent committed Mar 15, 2022
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Commits on Mar 16, 2022

  1. add dataset tests

    @jdkent
    jdkent committed Mar 16, 2022
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  2. track sql statements

    @jdkent
    jdkent committed Mar 16, 2022
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Commits on Mar 17, 2022

  1. add debug variable

    @jdkent
    jdkent committed Mar 17, 2022
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  2. change encoder, and make sure to not validate responses

    @jdkent
    jdkent committed Mar 17, 2022
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  3. change relationships to fix sqlalchemy warnings

    @jdkent
    jdkent committed Mar 17, 2022
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  4. bypass marshmallow serialization for something faster

    @jdkent
    jdkent committed Mar 17, 2022
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  5. add orjson to requirements

    @jdkent
    jdkent committed Mar 17, 2022
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  6. Merge branch 'master' of github.com:neurostuff/neurostore into maint/… 

    …nested_queries
    @jdkent
    jdkent committed Mar 17, 2022
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Commits on Mar 18, 2022

  1. add desired relationships

    @jdkent
    jdkent committed Mar 18, 2022
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  2. move or_json encoders to their own file

    @jdkent
    jdkent committed Mar 18, 2022
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  3. optimize models with nested relationships and override default when n… 

    …ot getting nested data
    @jdkent
    jdkent committed Mar 18, 2022
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  4. clean inefficient schemas

    @jdkent
    jdkent committed Mar 18, 2022
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  5. fix boolean

    @jdkent
    jdkent committed Mar 18, 2022
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  6. remove image metadata on schema

    @jdkent
    jdkent committed Mar 18, 2022
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  7. add user_id to manual schema

    @jdkent
    jdkent committed Mar 18, 2022
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  8. move loading strategy earlier

    @jdkent
    jdkent committed Mar 18, 2022
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Commits on Mar 21, 2022

  1. change relationships to primary lazy

    @jdkent
    jdkent committed Mar 21, 2022
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  2. add nested_load function back in

    @jdkent
    jdkent committed Mar 21, 2022
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  3. fix image test

    @jdkent
    jdkent committed Mar 21, 2022
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  4. eager load studies from datasetstudy table

    @jdkent
    jdkent committed Mar 21, 2022
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Commits on Mar 22, 2022

  1. add snapshot to init

    @jdkent
    jdkent committed Mar 22, 2022
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  2. add updated_at to schemas and properly handle datetime objects

    @jdkent
    jdkent committed Mar 22, 2022
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  3. fix analyses test

    @jdkent
    jdkent committed Mar 22, 2022
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  4. ensure snapshot is in line with schema

    @jdkent
    jdkent committed Mar 22, 2022
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  5. split functions into separate files for parsimony

    @jdkent
    jdkent committed Mar 22, 2022
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