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When the JS inputs get parsed currently they do not work correctly. In CWL the scatter results in a single input for a given name. The parser currently parses everything at once so this results in a single array of files which do not have the JS attributes (e.g. nameroot).
When the JS inputs get parsed currently they do not work correctly. In CWL the scatter results in a single input for a given name. The parser currently parses everything at once so this results in a single array of files which do not have the JS attributes (e.g. nameroot).
This should have each read separately with associated information.
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