Unable to initialize nextflow environment

[jammywwh]

Hi! everyone.

I'm a rookie in using Nextflow.

I checked the version of java in our cluster is 1.8.0_191. But when i installed Nextflow through "curl -s https://get.nextflow.io | bash", those info came out.

"
CAPSULE: Jar: /lustre/home/wuwh/.nextflow/framework/21.04.3/nextflow-21.04.3-one.jar
CAPSULE: Platform: linux
CAPSULE: Loading caplet: MavenCapsule
CAPSULE: Applying caplet MavenCapsule
CAPSULE: Initializing app ID
CAPSULE: Initialized app ID: nextflow_21.04.3
CAPSULE: Launching app nextflow_21.04.3
CAPSULE: WARNING resolve [] was empty
CAPSULE: WARNING resolve [] was empty
CAPSULE: Cache directory: /lustre/home/wuwh/.nextflow/capsule
CAPSULE: Dependency manager repositories: [central (https://repo1.maven.org/maven2/, default, releases), seqera (seqera, default, releases)]
CAPSULE: Resolving artifact org.slf4j:log4j-over-slf4j:pom:1.7.25
CAPSULE: Downloading artifact org.slf4j:log4j-over-slf4j:pom:1.7.25 from central (https://repo1.maven.org/maven2/, default, releases)
CAPSULE: Downloading: https://repo1.maven.org/maven2/org/slf4j/log4j-over-slf4j/1.7.25/log4j-over-slf4j-1.7.25.pom
CAPSULE: Transfer failed: capsule.org.eclipse.aether.transfer.ArtifactTransferException: Could not transfer artifact org.slf4j:log4j-over-slf4j:pom:1.7.25 from/to central (https://repo1.maven.org/maven2/): Function not implemented
capsule.org.eclipse.aether.transfer.ArtifactTransferException: Could not transfer artifact org.slf4j:log4j-over-slf4j:pom:1.7.25 from/to central (https://repo1.maven.org/maven2/): Function not implemented
at capsule.org.eclipse.aether.connector.basic.ArtifactTransportListener.transferFailed(ArtifactTransportListener.java:43)
at capsule.org.eclipse.aether.connector.basic.BasicRepositoryConnector$TaskRunner.run(BasicRepositoryConnector.java:355)
at capsule.org.eclipse.aether.util.concurrency.RunnableErrorForwarder$1.run(RunnableErrorForwarder.java:67)
at capsule.org.eclipse.aether.connector.basic.BasicRepositoryConnector$DirectExecutor.execute(BasicRepositoryConnector.java:581)
"

I found Marc Logghe writed "Solved ! My home folder is a lustre mount. But it was mounted without file locking ... When remounted with file locking support all went well." on the website (https://groups.google.com/g/nextflow/c/x1EvTWwYAG8).

Does the error i got is same to this? How can i solve it?

Thx.

[jammywwh]

Hi, everyone,
I modified all “$HOME” to "/opt/biosoft" in nextflow file. Because my home folder is a lustre mount, /opt/biosoft where i installed nextflow is not a lustre folder. Everything is ok.