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Are you using the latest release? using master branch
Describe the bug the --minlen option of funannotate sort isno longer working (writing smaller contigs)
funannotate sort
What command did you issue? funannotate sort --input input.fa --out output.fa --base 'something' --minlen 2100
funannotate sort --input input.fa --out output.fa --base 'something' --minlen 2100
The if/else logic is not working as expected after recent refactoring at
funannotate/funannotate/sort.py
Line 36 in afeeb4d
The text was updated successfully, but these errors were encountered:
I can fix that - you can also use AAFTF for sorting.
Sorry, something went wrong.
fix sorting by length #896
c33d1f7
Thanks, the fix works!
No branches or pull requests
Are you using the latest release?
using master branch
Describe the bug
the --minlen option of
funannotate sort
isno longer working (writing smaller contigs)What command did you issue?
funannotate sort --input input.fa --out output.fa --base 'something' --minlen 2100
The if/else logic is not working as expected after recent refactoring at
funannotate/funannotate/sort.py
Line 36 in afeeb4d
The text was updated successfully, but these errors were encountered: