ancestral.rst

augur ancestral

Example Node Data JSON

Here's an example of the output node-data JSON where NODE_1 has no mutations compared to it's parent and NODE_2 has multiple mutations.

{
    "nodes": {
        "NODE_1": {
            "muts": [],
            "sequence": "TCCAAACAAAGT..."
        },
        "NODE_2": {
            "muts": [
              "A4461G",
              "A6591G",
              "A9184C",
              "A10385T",
              "T15098C"
            ],
            "sequence": "TCCAAACAAAGT..."
        }
    }
}