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nextstrain remote

nextstrain remote

usage: nextstrain remote [-h] {upload,download,list,ls,delete,rm} ...

Upload, download, and manage remote datasets and narratives.

nextstrain.org is the primary remote source/destination for most users, but Amazon S3 buckets are also supported for some internal use cases.

Remote sources/destinations are specified using URLs starting with https://nextstrain.org/ and s3://<bucket-name>/. nextstrain.org remote URLs represent datasets and narratives each as a whole, where datasets may consist of multiple files (the main JSON file + optional sidecar files) when uploading/downloading. Amazon S3 remote URLs represent dataset and narrative files individually.

For more details on using each remote, see their respective documentation pages:

  • /remotes/nextstrain.org
  • /remotes/s3

For more information on dataset (Auspice JSON) and narrative (Markdown) files, see docs:reference/data-formats.

options

-h, --help

show this help message and exit

commands

upload

Upload dataset and narrative files. See /commands/remote/upload.

download

Download dataset and narrative files. See /commands/remote/download.

list

List datasets and narratives. See /commands/remote/list.

delete

Delete dataset and narratives. See /commands/remote/delete.