reference_vic_ha.gb

LOCUS       CY018813                1842 bp    DNA              VRL 29-DEC-2006
DEFINITION  Influenza B virus (B/Hong Kong/02/1993) segment 4, complete
            sequence.
ACCESSION   CY018813
VERSION     CY018813.1
KEYWORDS    .
SOURCE      Influenza B virus (B/Hong Kong/02/1993)
  ORGANISM  Influenza B virus (B/Hong Kong/02/1993)
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Orthomyxoviridae; Influenzavirus B.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Spiro,D., Sengamalay,N., Boyne,A., Bera,J., Halpin,R., Wang,S.,
            Ghedin,E., Zaborsky,J., Subbu,V., Sparenborg,J., Gallagher,T.,
            Overton,L., Althoff,R., Liu,X., Salzberg,S.L., Sitz,J., Katzel,D.,
            Neupane,R., Shumway,M., Koo,H., Griesemer,S., St. George,K.,
            Bennett,R., Taylor,J., Klimov,A., Hall,H., Balish,A., Xu,X.,
            Shaw,M., Cox,N., Bao,Y., Bolotov,P., Dernovoy,D., Kiryutin,B.,
            Lipman,D.J. and Tatusova,T.
  TITLE     The NIAID Influenza Genome Sequencing Project
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1842)
  CONSRTM   The NIAID Influenza Genome Sequencing Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-DEC-2006) on behalf of TIGR/Wadsworth-NYSDOH and
            CDC/NCBI, National Center for Biotechnology Information, NIH,
            Bethesda, MD 20894, USA
FEATURES             Location/Qualifiers
     source          1..1842
                     /collection_date="15-Feb-1993"
                     /country="Hong Kong: Hong Kong"
                     /db_xref="taxon:416687"
                     /host="Homo sapiens"
                     /lab_host="MDCK 4 passage(s)"
                     /mol_type="viral cRNA"
                     /organism="Influenza B virus (B/Hong Kong/02/1993)"
                     /segment="4"
                     /strain="Influenza B virus (B/Hong Kong/02/1993)"
     gene            12..1769
                     /gene="HA"
     CDS             12..57
                     /product="Signal peptide"
                     /gene="SigPep"
     CDS             57..1095
                     /product="HA1 protein"
                     /gene="HA1"
     CDS             1095..1769
                     /product="HA2 protein"
                     /gene="HA2"                     
                     
ORIGIN
        1 atatccacaa aatgaaggca ataattgtac tactcatggt agtaacatcc aatgcagatc
       61 gaatctgcac tgggataaca tcgtcaaact caccccatgt ggtcaaaact gctactcaag
      121 gggaagtcaa tgtgactggt gtgataccac tgacaacaac acccaccaaa tctcattttg
      181 caaatctcaa aggaacaaaa accagaggga aactatgccc aaagtgtctc aactgcacag
      241 atctggacgt ggccttgggc agaccaaaat gcacggggac cataccttcg gcaaaagttt
      301 caatactcca cgaagtcaaa cctgttacat ctgggtgctt tcctataatg cacgacagaa
      361 caaaaattag acagctgccc aatcttctca gaggatacga acatatcagg ttatcaaccc
      421 ataacgttat caacgcagaa aaggcaccag gaggacccta caaaattgga acctcagggt
      481 cttgccctaa cattaccaat ggaaacggat tcttcgcaac aatggcttgg gctgtcccaa
      541 aaaacgacaa caacaaaaca gcaacaaatt cattaacagt agaagtacca tacatttgta
      601 cagaaggaga agaccaaatt accgtttggg ggttccactc tgataacgaa acccaaatgg
      661 caaaactcta tggagactca aaacctcaga agttcacctc atctgccaac ggagtgacca
      721 cacattacgt ttcacagatt ggtggcttcc caaatcaagc agaagacgga gggctaccac
      781 aaagtggtag aattgttgtt gattacatgg tgcaaaaatc tggaaaaaca ggaacaatta
      841 cctaccaaag aggtatttta ttgcctcaaa aagtgtggtg cgcaagtggc aggagcaagg
      901 taataaaagg atccttgcct ttaattggcg aagcagattg cctccacgaa aaatacggtg
      961 gattaaacaa aagcaagcct tactacacag gggaacatgc aaaagccata ggaaattgcc
     1021 caatatgggt gaaaacaccc ttgaatctgg ccaatggaac caaatataga cctcctgcaa
     1081 aactattaaa agaaaggggt ttcttcggag ctattgctgg tttcttagaa ggaggatggg
     1141 aaggaatgat tgcaggttgg cacggataca catcccatgg agcacatgga gtagcagtgg
     1201 cagcagacct taagagtaca caagaagcca taaacaagat aacaaaaaat ctcaactctt
     1261 tgagtgagct tgaagtaaag aatcttcaaa gactaagcgg tgccatggat gaactccaca
     1321 acgaaatact cgaactggat gagaaagtgg atgatctcag agctgacaca ataagctcgc
     1381 aaatagagct cgcagtcttg ctttccaatg aaggaataat aaacagcgaa gatgagcatc
     1441 tcttggcact tgaaagaaaa ctgaagaaaa tgctgggccc ctctgctgta gagataggga
     1501 atggatgctt cgaaaccaaa cacaagtgca accagacctg cctcgacaga atagctgctg
     1561 gcacctttaa tgcaggagaa ttttctctcc ccacctttga ttcattaaat attactgctg
     1621 catctttaaa tgatgatgga ttggataatc atactatact gctttactac tcaactgctg
     1681 cttccagttt ggctgtaaca ttgatgatag ctatctttat tgtttatatg gtctccagag
     1741 acaatgtttc ttgctccatc tgtctataag gaaagttaag ccctgtattt tcctttattg
     1801 tagtgcttgt ttgcttgtta ccattacaaa aaacgttatt ga
//