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The default profiles test,docker do not work #368

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evanfloden opened this issue Mar 9, 2020 · 1 comment
Closed

The default profiles test,docker do not work #368

evanfloden opened this issue Mar 9, 2020 · 1 comment

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@evanfloden
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The profile test does not contain a parameter for --paired_end.

The following should work for all nf-core pipelines:

$ nextflow run nf-core/eager -profile test,docker

This can be fixed by adding paired_end = true to the test config.
@jfy133
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jfy133 commented Mar 9, 2020 •
edited

Addressed by @evanfloden in #369

@jfy133 jfy133 closed this as completed Mar 10, 2020
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@evanfloden @jfy133