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Validation with rtgtools/hap.py #250

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ramprasadn opened this issue Nov 8, 2022 · 2 comments
Closed

Validation with rtgtools/hap.py #250

ramprasadn opened this issue Nov 8, 2022 · 2 comments
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@ramprasadn
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enhancement Improvement for existing functionality
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Release 1.2.0

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@ramprasadn
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Description of feature

Would be good to add a subworkflow that runs rtgtools/happy to compare the called variants against a truth set.
@ramprasadn ramprasadn added the enhancement Improvement for existing functionality label Nov 8, 2022
@ramprasadn ramprasadn self-assigned this Nov 8, 2022
@jemten
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jemten commented Nov 9, 2022

Could be worth looking into the discussion here nf-core/sarek#798

@jemten jemten added this to the Release 1.2.0 milestone Jan 15, 2024
@ramprasadn ramprasadn mentioned this issue Jan 22, 2024
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jemten commented Jan 25, 2024

done in #484

@jemten jemten closed this as completed Jan 25, 2024
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