STAR biocontainer is incorrect (not 2.7.10a version)

[mauro-saporita]

Description of the bug

The biocontainer definded for STAR align and genomegenerate uses STAR version 2.7.9a while it should be 2.7.10a

Command used and terminal output

docker run -it quay.io/biocontainers/mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:1df389393721fc66f3fd8778ad938ac711951107-0 bash -l

then

STAR --version

Relevant files

No response

System information

No response

[drpatelh]

This needs to be tested. I wonder if it's an accidental mix-up between using an iGenomes vs non iGenomes parameter of some sort.

[pinin4fjords]

I've checked both of the containers in dev (for igenomes and non-igenomes):

$ docker run --rm quay.io/biocontainers/mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:ded3841da0194af2701c780e9b3d653a85d27489-0 STAR --version

Unable to find image 'quay.io/biocontainers/mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:ded3841da0194af2701c780e9b3d653a85d27489-0' locally
ded3841da0194af2701c780e9b3d653a85d27489-0: Pulling from biocontainers/mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2
fa7e54f17dc0: Already exists 
4ca545ee6d5d: Already exists 
d684ef4b7453: Pull complete 
Digest: sha256:83108da9fa9e8a9271a50fe319cadf7b27037423d7d80cb9c168969b917fdfff
Status: Downloaded newer image for quay.io/biocontainers/mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:ded3841da0194af2701c780e9b3d653a85d27489-0
WARNING: The requested image's platform (linux/amd64) does not match the detected host platform (linux/arm64/v8) and no specific platform was requested
2.7.10a

$ docker run --rm quay.io/biocontainers/mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:59cdd445419f14abac76b31dd0d71217994cbcc9-0 STAR --version

Unable to find image 'quay.io/biocontainers/mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:59cdd445419f14abac76b31dd0d71217994cbcc9-0' locally
59cdd445419f14abac76b31dd0d71217994cbcc9-0: Pulling from biocontainers/mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2
a3ed95caeb02: Pull complete 
b0dc45cd432d: Pull complete 
9466b3513669: Pull complete 
ddd482ea7b54: Pull complete 
4d69f833b9d8: Pull complete 
e7c454e5167d: Pull complete 
e38092b005c0: Pull complete 
f879b42dfe2b: Pull complete 
305d11768958: Pull complete 
Digest: sha256:74c2d751f5090bdc543f8922f37ab52cc0fae1f295e73923e00a694a697535d9
Status: Downloaded newer image for quay.io/biocontainers/mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:59cdd445419f14abac76b31dd0d71217994cbcc9-0
WARNING: The requested image's platform (linux/amd64) does not match the detected host platform (linux/arm64/v8) and no specific platform was requested
STAR_2.6.1d

Both versions obtained are as stated in the respective Conda definitions. So I'm considering this resolved.