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meta.yml
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meta.yml
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name: gffread
description: Validate, filter, convert and perform various other operations on GFF files
keywords:
- gff
- conversion
- validation
tools:
- gffread:
description: GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more.
homepage: http://ccb.jhu.edu/software/stringtie/gff.shtml#gffread
documentation: http://ccb.jhu.edu/software/stringtie/gff.shtml#gffread
tool_dev_url: https://github.com/gpertea/gffread
doi: 10.12688/f1000research.23297.1
licence: ["MIT"]
input:
- gff:
type: file
description: A reference file in either the GFF3, GFF2 or GTF format.
pattern: "*.{gff, gtf}"
output:
- gtf:
type: file
description: GTF file resulting from the conversion of the GFF input file
pattern: "*.{gtf}"
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
authors:
- "@emiller88"