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meta.yml
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meta.yml
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name: tabix_bgzip
description: Compresses/decompresses files
keywords:
- compress
- decompress
- bgzip
- tabix
tools:
- bgzip:
description: |
Bgzip compresses or decompresses files in a similar manner to, and compatible with, gzip.
homepage: https://www.htslib.org/doc/tabix.html
documentation: http://www.htslib.org/doc/bgzip.html
doi: 10.1093/bioinformatics/btp352
licence: ["MIT"]
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- input:
type: file
description: file to compress or to decompress
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- output:
type: file
description: Output compressed/decompressed file
pattern: "*."
- gzi:
type: file
description: Optional gzip index file for compressed inputs
pattern: "*.gzi"
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
authors:
- "@joseespinosa"
- "@drpatelh"
- "@maxulysse"
- "@nvnieuwk"