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Much like #4 but this dataset has to be uploaded to nf-core/test-datasets so we can use GitHub Actions CI to perform an end-to-end test of the pipeline for all PRs.
Much like #4 but this dataset has to be uploaded to nf-core/test-datasets so we can use GitHub Actions CI to perform an end-to-end test of the pipeline for all PRs.
Maybe we can use some of the data @thanhleviet added here for now and then refine as required:
https://github.com/nf-core/test-datasets/tree/covid19
I have created a branch called
viralrecon
thats an exact copy ofcovid19
above:https://github.com/nf-core/test-datasets/tree/viralrecon
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