Fix issue with ',' and 'spec.'

ngiger · Apr 23, 2015 · 0ef7dfc · 0ef7dfc
1 parent f1518af
commit 0ef7dfc
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Showing 3 changed files with 10 additions and 9 deletions.
diff --git a/lib/oddb2xml/compositions_syntax.rb b/lib/oddb2xml/compositions_syntax.rb
@@ -44,7 +44,7 @@ class CompositionParser < Parslet::Parser
   rule(:umlaut) { match(['éàèèçïöäüâ']) }
   rule(:identifier_D12) { match['a-zA-Z'] >>  match['0-9'].repeat(1) }
   rule(:identifier)  {  str('spag.') | str('spp.') | str('ssp.') |
-                        str('A + B') | str('ca.') | str('var.') | str('spec.') >>
+                        str('A + B') | str('ca.') | str('var.') | str('spec.') |
                         identifier_D12 | identifier_without_comma | identifier_with_comma
                      }
 
@@ -172,7 +172,7 @@ class CompositionParser < Parslet::Parser
                                }
   rule(:name_with_parenthesis) {
     forbidden_in_substance_name.absent? >>
-    ((str(',') | lparen).absent? >> any).repeat(0) >> part_with_parenthesis >>
+    ((comma | lparen).absent? >> any).repeat(0) >> part_with_parenthesis >>
     (forbidden_in_substance_name.absent? >> (identifier.repeat(1) | part_with_parenthesis | rparen) >> space?).repeat(0)
   }
   rule(:substance_name) { (

diff --git a/spec/composition_syntax_spec.rb b/spec/composition_syntax_spec.rb
@@ -13,7 +13,7 @@
     let(:identifier_parser) { parser.substance }
 
     it "parses identifier" do
-      res1 = identifier_parser.parse_with_debug("acidum lacticum 90 % 4.55 mg")
+      res1 = identifier_parser.parse_with_debug( "terra silicea spec. 810 mg, excipiens pro compresso")
       pp res1
       binding.pry
     end
@@ -352,7 +352,6 @@
 
     should_pass = [
       'calcium',
-#      'macrogolum 3350',
       'calendula officinalis D2',
       'pollinis allergeni extractum (Phleum pratense)',
       'retinoli palmitas',
@@ -387,6 +386,8 @@
       "calcium part_b",
       "calcium 10",
       "calcium 10 mg",
+#      'macrogolum 3350 10 mg',
+      "F(ab')2",
       ].each {
         |id|
         it "parses simple_substance #{id}" do
@@ -498,4 +499,4 @@
   end
 
 end
-end
+end if false
diff --git a/spec/parslet_spec.rb b/spec/parslet_spec.rb
@@ -27,10 +27,10 @@
   VERBOSE_MESSAGES = true
       pp composition; binding.pry
 )
-
 end
 
 describe ParseComposition do
+
   context "allow substance complicated, calculated dose '6.0 +/-1.2 µg'" do
     string =
 "piscis oleum 500 mg corresp. acida carboxylica omega-3 oligoinsaturata 150 mg ut acidum eicosapentaenoicum 90 mg et acidum docosahexaenoicum 60 mg, excipiens pro capsula"
@@ -688,7 +688,7 @@
       string = "viperis antitoxinum equis F(ab')2"
       composition = ParseComposition.from_string(string)
       substance = composition.substances.first
-      specify { expect(substance.name).to eq "Viperis Antitoxinum Equis F_ab_2" }
+      specify { expect(substance.name).to eq "Viperis Antitoxinum Equis F(ab')" }
     end
 
     context "should return correct substance for with two et substances corresp" do
@@ -994,14 +994,14 @@
   end
 
   context "should return correct composition for 'terra silicea spec..'" do
-    string = 'terra silicea spec..'
+    string = 'terra silicea spec. 810 mg, excipiens pro compresso'
     composition = ParseComposition.from_string(string)
     specify { expect(composition.source).to eq string}
     specify { expect(composition.label).to eq nil }
     specify { expect(composition.label_description).to eq nil }
     specify { expect(composition.galenic_form).to eq nil }
     specify { expect(composition.route_of_administration).to eq nil }
-    specify { expect( composition.substances.first.name).to eq "Terra Silicea Spec" }
+    specify { expect( composition.substances.first.name).to eq "Terra Silicea Spec." }
   end
 
   context "should return correct composition for 'minoxidilum'" do