Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
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.github update PR template Jul 2, 2018
_static added ecoli comparision matrices Jul 13, 2018
jetstream Update login.md Jul 2, 2018
scripts Added scripts in the main repo Jul 1, 2018
.gitignore machinery Jun 29, 2018
ExploratoryAnalysis.Rmd some explore Jul 9, 2018
ExploratoryAnalysis.html link to rendered html Jul 9, 2018
Makefile a fresh start for 2018 Jun 29, 2018
StatsNstuff.pdf It's a talk! Jul 6, 2018
chip-seq.md Fix bedtools command - was using wrong input file Jul 10, 2018
code-of-conduct.rst a fresh start for 2018 Jun 29, 2018
compare_transcriptome_assembly_to_ref.md Update compare_transcriptome_assembly_to_ref.md Jul 6, 2018
conf.py a fresh start for 2018 Jun 29, 2018
dammit_annotation.md Update dammit_annotation.md Jul 11, 2018
genome-assembly.md initial assembly challenge Jul 6, 2018
index.md Update index.md Jul 13, 2018
jetstream-bioconda-config.md Update jetstream-bioconda-config.md Jul 9, 2018
mapping-variant-calling.md Update mapping-variant-calling.md Jul 4, 2018
metagenomics_anvio.md Update metagenomics_anvio.md Jul 13, 2018
online-tools.md Update online-tools.md Jul 3, 2018
quality-and-trimming.md Merge pull request #380 from ljcohen/2018 Jul 6, 2018
requirements.txt add requirements Jun 29, 2018
rmarkdown_rnaseq.md Fixed image version Jul 9, 2018
rna-seq.md Fixed links Jul 1, 2018
running-command-line-blast.md Update running-command-line-blast.md Jul 2, 2018
sourmash.md upd with many small fixes and qs Jul 13, 2018
toc.rst Update toc.rst Jul 12, 2018
transcriptome-assembly.md Update transcriptome-assembly.md Jun 30, 2018
visualizing-blast-scores-with-RStudio.md Removed rstudio image Jul 2, 2018
where_to_put_data.md Update where_to_put_data.md Jul 12, 2018