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  1. genomics_scripts genomics_scripts Public

    scripts produced to work with the notch2nl regions

    Python

  2. Comparative-Annotation-Toolkit Comparative-Annotation-Toolkit Public

    Forked from ComparativeGenomicsToolkit/Comparative-Annotation-Toolkit

    tools only

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  4. linkage_calc linkage_calc Public

    A C++ program that utilizes gametic linkage disequilibrium, permutation tests, and bootstrapping to calculate linkage from a multi-sample gvcf

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  5. freebayes freebayes Public

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  6. htslib htslib Public

    Forked from samtools/htslib

    C library for high-throughput sequencing data formats

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