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Code used to analyze and produce figures during tenure in the Translational Tumor Engineering Lab

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Translation Tumor Engineering (TTE) Lab

This repository contains code used to analyze and present bioinformatics data during my tenure in the lab (Aug 2020 - present). Folders are grouped according to the relevant papers, with details further described below.

1. HCC-Endothelial Co-culture Biomaterials 2022

Hepatocellular carcinoma organoid co-cultures mimic angiocrine crosstalk to generate inflammatory tumor microenvironment, link here.

2. HNSCC Explant on Hydrogel 2023

Bioengineered hydrogels preserve patient-derived tumor explants for evaluating immune checkpoint blockade, [in review].

3. HNSCC CAF States HA 2023

Data-driven design of tunable hydrogels recapitulate fibroblast heterogeneity in cancer, [in preparation].

4. PDAC CAF scRNA-seq 2023

In collaboration with Lab of Translational Cancer Biology (Dr Tam Wai Leong, GIS, A*STAR), [in review with Cancer Discovery].

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Code used to analyze and produce figures during tenure in the Translational Tumor Engineering Lab

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