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rf: update syntax and add nipype
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nicholsn committed Aug 24, 2014
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Showing 1 changed file with 18 additions and 13 deletions.
31 changes: 18 additions & 13 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -2,19 +2,24 @@ FROM ubuntu:14.04
MAINTAINER Nolan Nichols <orcid.org/0000-0003-1099-3328>
ENV UPDATED "Sat Aug 16 16:07:27 PDT 2014"

RUN apt-get update
RUN apt-get -y install wget
RUN wget http://repo.continuum.io/miniconda/Miniconda-3.6.0-Linux-x86_64.sh -O /tmp/miniconda.sh -q
RUN chmod +x /tmp/miniconda.sh
RUN /tmp/miniconda.sh -b -p /usr/local/miniconda
RUN \
apt-get update && \
apt-get -y install wget && \
wget http://repo.continuum.io/miniconda/Miniconda-3.6.0-Linux-x86_64.sh -O /tmp/miniconda.sh -q && \
chmod +x /tmp/miniconda.sh && \
/tmp/miniconda.sh -b -p /usr/local/miniconda

ENV PATH /usr/local/miniconda/bin:$PATH
RUN conda update -q conda
RUN conda install -q pip flask mock pandas requests
RUN pip install -q celery
RUN pip install -q https://github.com/twilio/flask-restful/archive/master.zip
RUN pip install -q https://github.com/RDFLib/rdflib/archive/master.zip
RUN pip install -q https://github.com/trungdong/prov/archive/rdf.zip
RUN pip install -q https://github.com/nicholsn/niquery/archive/master.zip

RUN \
conda update -q conda && \
conda install -q pip flask mock pandas requests nose networkx scipy numpy ipython-notebook dateutil && \
pip install -q celery && \
pip install -q https://github.com/twilio/flask-restful/archive/master.zip && \
pip install -q https://github.com/RDFLib/rdflib/archive/master.zip && \
pip install -q https://github.com/trungdong/prov/archive/rdf.zip && \
pip install -q https://github.com/nicholsn/niquery/archive/master.zip && \
pip install -q https://github.com/nipy/nipype/archive/master.zip && \

EXPOSE 5000
CMD /usr/local/miniconda/bin/niquery
CMD /usr/local/miniconda/bin/niquery

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