polySimIBD

The goal of polySimIBD is to perform forwards in-time simulation of malaria population genetics. The model uses a spatial discrete-time, discrete-loci structured Wright Fisher approximation to account for (simplified) malaria transmission dynamics.

Development

⚠️ This project is under active development. As a result, parameter names and behaviors as well as output file formats may change. Releases will be noted in the "News" version number change.

Installation & Use

Please see the vignettes for installation and use instructions. Thank you for your interest in our package!