forked from juju/juju
/
mongo.go
743 lines (644 loc) · 21.8 KB
/
mongo.go
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// Copyright 2014 Canonical Ltd.
// Licensed under the AGPLv3, see LICENCE file for details.
package mongo
import (
"crypto/rand"
"encoding/base64"
"fmt"
"net"
"os"
"os/exec"
"path"
"path/filepath"
"strconv"
"strings"
"github.com/juju/errors"
"github.com/juju/loggo"
"github.com/juju/os/series"
"github.com/juju/packaging/config"
"github.com/juju/packaging/manager"
"github.com/juju/replicaset"
"github.com/juju/utils"
"github.com/juju/utils/featureflag"
"gopkg.in/mgo.v2"
"github.com/juju/juju/controller"
"github.com/juju/juju/feature"
"github.com/juju/juju/network"
"github.com/juju/juju/service"
"github.com/juju/juju/service/common"
"github.com/juju/juju/service/snap"
)
var (
logger = loggo.GetLogger("juju.mongo")
mongoConfigPath = "/etc/default/mongodb"
// JujuMongod24Path holds the default path to the legacy Juju
// mongod.
JujuMongod24Path = "/usr/lib/juju/bin/mongod"
// JujuMongod32Path holds the default path to juju-mongodb3.2
JujuMongod32Path = "/usr/lib/juju/mongo3.2/bin/mongod"
// MongodSystemPath is actually just the system path
MongodSystemPath = "/usr/bin/mongod"
// This is NUMACTL package name for apt-get
numaCtlPkg = "numactl"
// mininmumSystemMongoVersion is the minimum version we would allow to be used from /usr/bin/mongod.
minimumSystemMongoVersion = Version{Major: 3, Minor: 4}
)
// StorageEngine represents the storage used by mongo.
type StorageEngine string
const (
// JujuMongoPackage is the mongo package Juju uses when
// installing mongo.
JujuMongoPackage = "juju-mongodb3.2"
// JujuDbSnap is the snap of MongoDB that Juju uses.
JujuDbSnap = "juju-db"
// JujuDbSnapMongodPath is the path that the juju-db snap
// makes mongod available at
JujuDbSnapMongodPath = "/snap/bin/juju-db.mongod"
// JujuMongoToolsPackage is the mongo package Juju uses when
// installing mongo tools to get mongodump etc.
JujuMongoToolsPackage = "juju-mongo-tools3.2"
// MMAPV1 is the default storage engine in mongo db up to 3.x
MMAPV1 StorageEngine = "mmapv1"
// WiredTiger is a storage type introduced in 3
WiredTiger StorageEngine = "wiredTiger"
// Upgrading is a special case where mongo is being upgraded.
Upgrading StorageEngine = "Upgrading"
)
// Version represents the major.minor version of the running mongo.
type Version struct {
Major int
Minor int
Patch string // supports variants like 1-alpha
StorageEngine StorageEngine
}
// NewerThan will return 1 if the passed version is older than
// v, 0 if they are equal (or ver is a special case such as
// Upgrading and -1 if ver is newer.
func (v Version) NewerThan(ver Version) int {
if v == MongoUpgrade || ver == MongoUpgrade {
return 0
}
if v.Major > ver.Major {
return 1
}
if v.Major < ver.Major {
return -1
}
if v.Minor > ver.Minor {
return 1
}
if v.Minor < ver.Minor {
return -1
}
return 0
}
// NewVersion returns a mongo Version parsing the passed version string
// or error if not possible.
// A valid version string is of the form:
// 1.2.patch/storage
// major and minor are positive integers, patch is a string containing
// any ascii character except / and storage is one of the above defined
// StorageEngine. Only major is mandatory.
// An alternative valid string is 0.0/Upgrading which represents that
// mongo is being upgraded.
func NewVersion(v string) (Version, error) {
version := Version{}
if v == "" {
return Mongo24, nil
}
parts := strings.SplitN(v, "/", 2)
switch len(parts) {
case 0:
return Version{}, errors.New("invalid version string")
case 1:
version.StorageEngine = MMAPV1
case 2:
switch StorageEngine(parts[1]) {
case MMAPV1:
version.StorageEngine = MMAPV1
case WiredTiger:
version.StorageEngine = WiredTiger
case Upgrading:
version.StorageEngine = Upgrading
}
}
vParts := strings.SplitN(parts[0], ".", 3)
if len(vParts) >= 1 {
i, err := strconv.Atoi(vParts[0])
if err != nil {
return Version{}, errors.Annotate(err, "Invalid version string, major is not an int")
}
version.Major = i
}
if len(vParts) >= 2 {
i, err := strconv.Atoi(vParts[1])
if err != nil {
return Version{}, errors.Annotate(err, "Invalid version string, minor is not an int")
}
version.Minor = i
}
if len(vParts) == 3 {
version.Patch = vParts[2]
}
if version.Major == 2 && version.StorageEngine == WiredTiger {
return Version{}, errors.Errorf("Version 2.x does not support Wired Tiger storage engine")
}
// This deserialises the special "Mongo Upgrading" version
if version.Major == 0 && version.Minor == 0 {
return Version{StorageEngine: Upgrading}, nil
}
return version, nil
}
// String serializes the version into a string.
func (v Version) String() string {
s := fmt.Sprintf("%d.%d", v.Major, v.Minor)
if v.Patch != "" {
s = fmt.Sprintf("%s.%s", s, v.Patch)
}
if v.StorageEngine != "" {
s = fmt.Sprintf("%s/%s", s, v.StorageEngine)
}
return s
}
// JujuMongodPath returns the path for the mongod binary
// with the specified version.
func JujuMongodPath(v Version) string {
return fmt.Sprintf("/usr/lib/juju/mongo%d.%d/bin/mongod", v.Major, v.Minor)
}
var (
// Mongo24 represents juju-mongodb 2.4.x
Mongo24 = Version{Major: 2,
Minor: 4,
Patch: "",
StorageEngine: MMAPV1,
}
// Mongo26 represents juju-mongodb26 2.6.x
Mongo26 = Version{Major: 2,
Minor: 6,
Patch: "",
StorageEngine: MMAPV1,
}
// Mongo32wt represents juju-mongodb3 3.2.x with wiredTiger storage.
Mongo32wt = Version{Major: 3,
Minor: 2,
Patch: "",
StorageEngine: WiredTiger,
}
// Mongo34wt represents 'mongodb-server-core' at version 3.4.x with WiredTiger
Mongo34wt = Version{Major: 3,
Minor: 4,
Patch: "",
StorageEngine: WiredTiger,
}
// Mongo36wt represents 'mongodb-server-core' at version 3.6.x with WiredTiger
Mongo36wt = Version{Major: 3,
Minor: 6,
Patch: "",
StorageEngine: WiredTiger,
}
// MongoUpgrade represents a sepacial case where an upgrade is in
// progress.
MongoUpgrade = Version{Major: 0,
Minor: 0,
Patch: "Upgrading",
StorageEngine: Upgrading,
}
)
// WithAddresses represents an entity that has a set of
// addresses. e.g. a state Machine object
type WithAddresses interface {
Addresses() []network.Address
}
// IsMaster returns a boolean that represents whether the given
// machine's peer address is the primary mongo host for the replicaset
func IsMaster(session *mgo.Session, obj WithAddresses) (bool, error) {
addrs := obj.Addresses()
masterHostPort, err := replicaset.MasterHostPort(session)
// If the replica set has not been configured, then we
// can have only one master and the caller must
// be that master.
if err == replicaset.ErrMasterNotConfigured {
return true, nil
}
if err != nil {
return false, err
}
masterAddr, _, err := net.SplitHostPort(masterHostPort)
if err != nil {
return false, err
}
for _, addr := range addrs {
if addr.Value == masterAddr {
return true, nil
}
}
return false, nil
}
// SelectPeerAddress returns the address to use as the mongo replica set peer
// address by selecting it from the given addresses. If no addresses are
// available an empty string is returned.
func SelectPeerAddress(addrs []network.Address) string {
// ScopeMachineLocal addresses are never suitable for mongo peers,
// as each controller runs on a separate machine.
const allowMachineLocal = false
// The second bool result is ignored intentionally (we return an empty
// string if no suitable address is available.)
addr, _ := network.SelectControllerAddress(addrs, allowMachineLocal)
return addr.Value
}
// GenerateSharedSecret generates a pseudo-random shared secret (keyfile)
// for use with Mongo replica sets.
func GenerateSharedSecret() (string, error) {
// "A key’s length must be between 6 and 1024 characters and may
// only contain characters in the base64 set."
// -- http://docs.mongodb.org/manual/tutorial/generate-key-file/
buf := make([]byte, base64.StdEncoding.DecodedLen(1024))
if _, err := rand.Read(buf); err != nil {
return "", fmt.Errorf("cannot read random secret: %v", err)
}
return base64.StdEncoding.EncodeToString(buf), nil
}
// Path returns the executable path to be used to run mongod on this
// machine. If the juju-bundled version of mongo exists, it will return that
// path, otherwise it will return the command to run mongod from the path.
func Path(version Version) (string, error) {
return mongoPath(version, os.Stat, exec.LookPath)
}
func mongoPath(
version Version,
stat func(string) (os.FileInfo, error),
lookPath func(string) (string, error),
) (string, error) {
// we don't want to match on patch so we remove it.
if version.Major == 2 && version.Minor == 4 {
if _, err := stat(JujuMongod24Path); err == nil {
return JujuMongod24Path, nil
}
path, err := lookPath("mongod")
if err != nil {
logger.Infof("could not find %v or mongod in $PATH", JujuMongod24Path)
return "", err
}
return path, nil
}
if version.Major == 3 && version.Minor == 6 {
if _, err := stat(MongodSystemPath); err == nil {
return MongodSystemPath, nil
} else {
return "", err
}
}
path := JujuMongodPath(version)
var err error
if _, err = stat(path); err == nil {
return path, nil
}
logger.Infof("could not find a suitable binary for %q", version)
errMsg := fmt.Sprintf("no suitable binary for %q", version)
return "", errors.New(errMsg)
}
/*
Values set as per bug:
https://bugs.launchpad.net/juju/+bug/1656430
net.ipv4.tcp_max_syn_backlog = 4096
net.core.somaxconn = 16384
net.core.netdev_max_backlog = 1000
net.ipv4.tcp_fin_timeout = 30
Values set as per mongod recommendation (see syslog on default mongod run)
/sys/kernel/mm/transparent_hugepage/enabled 'always' > 'never'
/sys/kernel/mm/transparent_hugepage/defrag 'always' > 'never'
*/
var mongoKernelTweaks = map[string]string{
"/sys/kernel/mm/transparent_hugepage/enabled": "never",
"/sys/kernel/mm/transparent_hugepage/defrag": "never",
"/proc/sys/net/ipv4/tcp_max_syn_backlog": "4096",
"/proc/sys/net/core/somaxconn": "16384",
"/proc/sys/net/core/netdev_max_backlog": "1000",
"/proc/sys/net/ipv4/tcp_fin_timeout": "30",
}
// NewMemoryProfile returns a Memory Profile from the passed value.
func NewMemoryProfile(m string) (MemoryProfile, error) {
mp := MemoryProfile(m)
if err := mp.Validate(); err != nil {
return MemoryProfile(""), err
}
return mp, nil
}
// MemoryProfile represents a type of meory configuration for Mongo.
type MemoryProfile string
// String returns a string representation of this profile value.
func (m MemoryProfile) String() string {
return string(m)
}
func (m MemoryProfile) Validate() error {
if m != MemoryProfileLow && m != MemoryProfileDefault {
return errors.NotValidf("memory profile %q", m)
}
return nil
}
const (
// MemoryProfileLow will use as little memory as possible in mongo.
MemoryProfileLow MemoryProfile = "low"
// MemoryProfileDefault will use mongo config ootb.
MemoryProfileDefault = "default"
)
// EnsureServerParams is a parameter struct for EnsureServer.
type EnsureServerParams struct {
// APIPort is the port to connect to the api server.
APIPort int
// StatePort is the port to connect to the mongo server.
StatePort int
// Cert is the certificate.
Cert string
// PrivateKey is the certificate's private key.
PrivateKey string
// CAPrivateKey is the CA certificate's private key.
CAPrivateKey string
// SharedSecret is a secret shared between mongo servers.
SharedSecret string
// SystemIdentity is the identity of the system.
SystemIdentity string
// DataDir is the machine agent data directory.
DataDir string
// Namespace is the machine agent's namespace, which is used to
// generate a unique service name for Mongo.
Namespace string
// OplogSize is the size of the Mongo oplog.
// If this is zero, then EnsureServer will
// calculate a default size according to the
// algorithm defined in Mongo.
OplogSize int
// SetNUMAControlPolicy preference - whether the user
// wants to set the numa control policy when starting mongo.
SetNUMAControlPolicy bool
// MemoryProfile determines which value is going to be used by
// the cache and future memory tweaks.
MemoryProfile MemoryProfile
}
// EnsureServer ensures that the MongoDB server is installed,
// configured, and ready to run.
//
// This method will remove old versions of the mongo init service as necessary
// before installing the new version.
func EnsureServer(args EnsureServerParams) (Version, error) {
return ensureServer(args, mongoKernelTweaks)
}
func setupDataDirectory(args EnsureServerParams) error {
dbDir := DbDir(args.DataDir)
if err := os.MkdirAll(dbDir, 0700); err != nil {
return errors.Annotate(err, "cannot create mongo database directory")
}
if err := UpdateSSLKey(args.DataDir, args.Cert, args.PrivateKey); err != nil {
return errors.Trace(err)
}
err := utils.AtomicWriteFile(sharedSecretPath(args.DataDir), []byte(args.SharedSecret), 0600)
if err != nil {
return errors.Annotatef(err, "cannot write mongod shared secret to %v", sharedSecretPath(args.DataDir))
}
if err := os.MkdirAll(logPath(dbDir), 0644); err != nil {
return errors.Annotate(err, "cannot create mongodb logging directory")
}
return nil
}
func ensureServer(args EnsureServerParams, mongoKernelTweaks map[string]string) (Version, error) {
var zeroVersion Version
tweakSysctlForMongo(mongoKernelTweaks)
if featureflag.Enabled(feature.MongoDbSnap) {
// TODO(tsm): push this to earlier in the bootstrapping process
if args.DataDir != dataPathForJujuDbSnap {
logger.Warningf("overwriting args.dataDir (set to %v) to %v", args.DataDir, dataPathForJujuDbSnap)
args.DataDir = dataPathForJujuDbSnap
}
}
logger.Infof(
"Ensuring mongo server is running; data directory %s; port %d",
args.DataDir, args.StatePort,
)
setupDataDirectory(args)
if err := installMongod(series.MustHostSeries(), args.SetNUMAControlPolicy); err != nil {
// This isn't treated as fatal because the Juju MongoDB
// package is likely to be already installed anyway. There
// could just be a temporary issue with apt-get/yum/whatever
// and we don't want this to stop jujud from starting.
// (LP #1441904)
logger.Errorf("cannot install/upgrade mongod (will proceed anyway): %v", err)
}
finder := NewMongodFinder()
mongoPath, mongodVersion, err := finder.FindBest()
if err != nil {
return zeroVersion, errors.Trace(err)
}
logVersion(mongoPath)
oplogSizeMB := args.OplogSize
if oplogSizeMB == 0 {
oplogSizeMB, err = defaultOplogSize(DbDir(args.DataDir))
if err != nil {
return zeroVersion, errors.Trace(err)
}
}
// Disable the default mongodb installed by the mongodb-server package.
// Only do this if the file doesn't exist already, so users can run
// their own mongodb server if they wish to.
if _, err := os.Stat(mongoConfigPath); os.IsNotExist(err) {
err = utils.AtomicWriteFile(
mongoConfigPath,
[]byte("ENABLE_MONGODB=no"),
0644,
)
if err != nil {
return zeroVersion, errors.Trace(err)
}
}
mongoArgs := generateConfig(mongoPath, args.DataDir, args.StatePort, oplogSizeMB, args.SetNUMAControlPolicy, mongodVersion, args.MemoryProfile)
logger.Debugf("creating mongo service configuration for mongo version: %d.%d.%s at %q",
mongoArgs.Version.Major, mongoArgs.Version.Minor, mongoArgs.Version.Patch, mongoArgs.MongoPath)
svc, err := mongoArgs.asService()
if err != nil {
return zeroVersion, errors.Trace(err)
}
// TODO(tsm): refactor out to service.Configure
if featureflag.Enabled(feature.MongoDbSnap) {
err = mongoArgs.writeConfig(configPath(args.DataDir))
if err != nil {
return zeroVersion, errors.Trace(err)
}
err := snap.SetSnapConfig(ServiceName, "configpath", configPath(args.DataDir))
if err != nil {
return zeroVersion, errors.Trace(err)
}
err = service.ManuallyRestart(svc)
if err != nil {
logger.Criticalf("unable to (re)start mongod service: %v", err)
return zeroVersion, errors.Trace(err)
}
return mongodVersion, nil
}
running, err := svc.Running()
if err != nil {
return zeroVersion, errors.Trace(err)
}
if running {
return mongodVersion, nil
}
dbDir := DbDir(args.DataDir)
if err := makeJournalDirs(dbDir); err != nil {
return zeroVersion, errors.Errorf("error creating journal directories: %v", err)
}
if err := preallocOplog(dbDir, oplogSizeMB); err != nil {
return zeroVersion, errors.Errorf("error creating oplog files: %v", err)
}
if err := service.InstallAndStart(svc); err != nil {
return zeroVersion, errors.Trace(err)
}
return mongodVersion, nil
}
func truncateAndWriteIfExists(procFile, value string) error {
if _, err := os.Stat(procFile); os.IsNotExist(err) {
logger.Debugf("%q does not exist, will not set %q", procFile, value)
return errors.Errorf("%q does not exist, will not set %q", procFile, value)
}
f, err := os.OpenFile(procFile, os.O_WRONLY|os.O_TRUNC, 0600)
if err != nil {
return errors.Trace(err)
}
defer f.Close()
_, err = f.WriteString(value)
return errors.Trace(err)
}
func tweakSysctlForMongo(editables map[string]string) {
for editableFile, value := range editables {
if err := truncateAndWriteIfExists(editableFile, value); err != nil {
logger.Errorf("could not set the value of %q to %q because of: %v\n", editableFile, value, err)
}
}
}
// UpdateSSLKey writes a new SSL key used by mongo to validate connections from Juju controller(s)
func UpdateSSLKey(dataDir, cert, privateKey string) error {
certKey := cert + "\n" + privateKey
err := utils.AtomicWriteFile(sslKeyPath(dataDir), []byte(certKey), 0600)
return errors.Annotate(err, "cannot write SSL key")
}
func makeJournalDirs(dataDir string) error {
journalDir := path.Join(dataDir, "journal")
if err := os.MkdirAll(journalDir, 0700); err != nil {
logger.Errorf("failed to make mongo journal dir %s: %v", journalDir, err)
return err
}
// Manually create the prealloc files, since otherwise they get
// created as 100M files. We create three files of 1MB each.
prefix := filepath.Join(journalDir, "prealloc.")
preallocSize := 1024 * 1024
return preallocFiles(prefix, preallocSize, preallocSize, preallocSize)
}
func logVersion(mongoPath string) {
cmd := exec.Command(mongoPath, "--version")
output, err := cmd.CombinedOutput()
if err != nil {
logger.Infof("failed to read the output from %s --version: %v", mongoPath, err)
return
}
logger.Debugf("using mongod: %s --version: %q", mongoPath, output)
}
func installPackage(pkg string, pacconfer config.PackagingConfigurer, pacman manager.PackageManager) error {
// apply release targeting if needed.
if pacconfer.IsCloudArchivePackage(pkg) {
pkg = strings.Join(pacconfer.ApplyCloudArchiveTarget(pkg), " ")
}
return pacman.Install(pkg)
}
func installMongod(operatingsystem string, numaCtl bool) error {
if featureflag.Enabled(feature.MongoDbSnap) {
prerequisites := []snap.App{snap.NewApp("core")}
backgroundServices := []snap.BackgroundService{{"daemon", true}}
conf := common.Conf{Desc: ServiceName + " snap"}
service, err := snap.NewService(ServiceName, conf, snap.Command, "edge", "jailmode", backgroundServices, prerequisites)
if err != nil {
return errors.Trace(err)
}
return service.Install()
}
// fetch the packaging configuration manager for the current operating system.
pacconfer, err := config.NewPackagingConfigurer(operatingsystem)
if err != nil {
return err
}
// fetch the package manager implementation for the current operating system.
pacman, err := manager.NewPackageManager(operatingsystem)
if err != nil {
return err
}
// CentOS requires "epel-release" for the epel repo mongodb-server is in.
if operatingsystem == "centos7" {
// install epel-release
if err := pacman.Install("epel-release"); err != nil {
return err
}
}
mongoPkgs, fallbackPkgs := packagesForSeries(operatingsystem)
if numaCtl {
logger.Infof("installing %v and %s", mongoPkgs, numaCtlPkg)
if err = installPackage(numaCtlPkg, pacconfer, pacman); err != nil {
return errors.Trace(err)
}
} else {
logger.Infof("installing %v", mongoPkgs)
}
for i := range mongoPkgs {
if err = installPackage(mongoPkgs[i], pacconfer, pacman); err != nil {
break
}
}
if err != nil && len(fallbackPkgs) == 0 {
return errors.Trace(err)
}
if err != nil {
logger.Errorf("installing mongo failed: %v", err)
logger.Infof("will try fallback packages %v", fallbackPkgs)
for i := range fallbackPkgs {
if err = installPackage(fallbackPkgs[i], pacconfer, pacman); err != nil {
return errors.Trace(err)
}
}
}
// Work around SELinux on centos7
if operatingsystem == "centos7" {
cmd := []string{"chcon", "-R", "-v", "-t", "mongod_var_lib_t", "/var/lib/juju/"}
logger.Infof("running %s %v", cmd[0], cmd[1:])
_, err = utils.RunCommand(cmd[0], cmd[1:]...)
if err != nil {
logger.Errorf("chcon failed to change file security context error %s", err)
return err
}
cmd = []string{"semanage", "port", "-a", "-t", "mongod_port_t", "-p", "tcp", strconv.Itoa(controller.DefaultStatePort)}
logger.Infof("running %s %v", cmd[0], cmd[1:])
_, err = utils.RunCommand(cmd[0], cmd[1:]...)
if err != nil {
if !strings.Contains(err.Error(), "exit status 1") {
logger.Errorf("semanage failed to provide access on port %d error %s", controller.DefaultStatePort, err)
return err
}
}
}
return nil
}
// packagesForSeries returns the name of the mongo package for the series
// of the machine that it is going to be running on plus a fallback for
// options where the package is going to be ready eventually but might not
// yet be.
func packagesForSeries(series string) ([]string, []string) {
switch series {
case "precise", "centos7":
return []string{"mongodb-server"}, []string{}
case "trusty":
return []string{"juju-mongodb"}, []string{}
case "xenial", "artful":
return []string{JujuMongoPackage, JujuMongoToolsPackage}, []string{}
default:
// Bionic and newer
return []string{"mongodb-server-core", "mongodb-clients"}, []string{}
}
}
// DbDir returns the dir where mongo storage is.
func DbDir(dataDir string) string {
return filepath.Join(dataDir, "db")
}