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Pinned repositories

  1. FAVITES

    FAVITES (FrAmework for VIral Transmission and Evolution Simulation)

    Python 8

  2. TreeSwift

    TreeSwift: Fast tree module for Python 2 and 3

    Python 16 2

  3. TreeCluster

    Efficient phylogenetic clustering of viral sequences

    Python

  4. tools

    A collection of command-line tools I wrote to make various repetitive tasks more convenient

    Python 5 2

  5. Algorithm-Problem-Solutions

    My solutions to problems from ROSALIND, Project Euler, and courses I have taken. This includes my own implementations of various data structures.

    Java 31 37

  6. Data-Structures-Textbook

    Repository for source code of the Data Structures online textbook (Niema Moshiri and Liz Izhikevich, 2016)

    Python 5 8

1,231 contributions in the last year

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Contribution activity

October 2018

Created a pull request in networkx/networkx that received 4 comments

Added dual Barabasi-Albert model

I added an extension of the Barabasi-Albert model that, when a new node is added, creates m1 new edges with probability p and creates m2 new edges …

+120 −0 4 comments

Created an issue in aboood40091/XTX-Extractor that received 1 comment

Any chance for TGA support?

TGA to XTX (as opposed to DDS to XTX) would be a nice feature to have

1 comment
1 contribution in private repositories Oct 4

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