🍲 POTFUL

POTFUL Plant cO-expression Transcription Factor regULators

Setup

A major requirement for POTFUL is RUST. The user must first install RUST on the OS of their choice.

Install Rust

Linux, WSL2 and mac OS

    curl https://sh.rustup.rs -sSf | sh

Windows 11/10

    run [vs_BuildTools.exe](https://aka.ms/vs/17/release/vs_BuildTools.exe) # `Microsoft C++ Build Tools`
    run rustup-init.exe[https://win.rustup.rs/]

You can learn a lot more at The Cargo Book.

Create conda environment

Fedora (36<) and Ubuntu (22<) and WSL2 POTFUL.yml

    conda env create -n POTFUL --file POTFUL.yml

Mac OS POTFUL_macPy39.yml

    conda env create -n POTFUL --file POTFUL_macPy39.yml

Windows 11/10 POTFUL_WinPy39.yml

conda env create -n POTFUL --file POTFUL_WinPy39.yml

Clone git repository

Fork the POTFUL git repository and clone or download.

git clone https://github.com/<User Name>/POTFUL.git

👉Full page Demo

Credits

POTFUL was originally written by Nilesh Kumar.

We thank the following people for their extensive assistance in the development of this pipeline:

We would also like to thank the following people and groups for their support, including financial support:

Dr. Shahid Mukhtar Dept. of Biology University of Alabama at Birmingham

Cite