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added docker
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nilesh-tawari committed Nov 2, 2017
1 parent 1c60525 commit 20090a4
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13 changes: 12 additions & 1 deletion README.rst
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Expand Up @@ -89,7 +89,18 @@ If you would like the development version instead, the command is::

pip install --upgrade --force-reinstall git+https://github.com/nilesh-tawari/ChronQC.git


Alternatively, ChronQC can also be used as Docker::

#Pull docker image
docker pull nileshtawari/chronqc:chronqc_1.0.3
#Run docker
docker run -it chronqc_1.0.3
#Test ChronQC using example data
cd /home/ChronQC
Then follow instructions given in `getting started. <http://chronqc.readthedocs.io/en/latest/run_chronqc.html#generating-chronqc-plots>`__.

Automation
==========
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17 changes: 17 additions & 0 deletions docs/chronqc_setup.rst
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Expand Up @@ -25,6 +25,7 @@ You can install ChronQC from PyPI using pip as follows::
conda config --add channels bioconda
conda install -c bioconda chronqc
..
Alternatively, you can install from GitHub::

git clone https://github.com/nilesh-tawari/ChronQC_dev.git
Expand All @@ -35,5 +36,21 @@ Alternatively, you can install from GitHub::
If you would like the development version instead, the command is::

pip install --upgrade --force-reinstall git+https://github.com/nilesh-tawari/ChronQC_dev.git

Alternatively, ChronQC can also be used as Docker::

#Pull docker image
docker pull nileshtawari/chronqc:chronqc_1.0.3
#Run docker
docker run -it chronqc_1.0.3
#Test ChronQC using example data
cd /home/ChronQC
Then follow instructions given in `getting started. <http://chronqc.readthedocs.io/en/latest/run_chronqc.html#generating-chronqc-plots>`__.


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