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After getting access to the offending data, I replicated the error and investigated the intermediate files. It appears the mask file used in the ICA-AROMA command was empty. I dug a little into the ICA-AROMA code, and it appears ambiguous what mask is used when you specify the --meldir option.
This is relevant as of the current 1.1.8 release of fmriprep.
The text was updated successfully, but these errors were encountered:
A user had a particular run that had no components classified as noise, resulting in fmriprep throwing an error (as expected).
After getting access to the offending data, I replicated the error and investigated the intermediate files. It appears the mask file used in the ICA-AROMA command was empty. I dug a little into the ICA-AROMA code, and it appears ambiguous what mask is used when you specify the
--meldir
option.This is relevant as of the current 1.1.8 release of fmriprep.
The text was updated successfully, but these errors were encountered: