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ENH: Separate surfaces and morphometrics into standalone outputs #359

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merged 4 commits into from
Aug 24, 2023

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mgxd
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@mgxd mgxd commented Aug 22, 2023

Rather than handling the paring down of surfaces when needed, this PR adds an aggregator node to collect and sort each surface output into a L/R list, simplifying retrieval for future use.

@mgxd mgxd requested a review from effigies August 22, 2023 19:30
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This looks reasonable. Assume you've tested? I'm not sure if this gets exercised by CI.

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codecov bot commented Aug 22, 2023

Codecov Report

Patch coverage: 48.38% and project coverage change: -0.05% ⚠️

Comparison is base (23f9dc4) 54.07% compared to head (cf49b5b) 54.03%.

Additional details and impacted files
@@            Coverage Diff             @@
##           master     #359      +/-   ##
==========================================
- Coverage   54.07%   54.03%   -0.05%     
==========================================
  Files          22       22              
  Lines        1459     1488      +29     
  Branches      206      209       +3     
==========================================
+ Hits          789      804      +15     
- Misses        614      628      +14     
  Partials       56       56              
Flag Coverage Δ
ds005 ∅ <ø> (∅)
ds054 44.01% <0.00%> (-0.88%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Files Changed Coverage Δ
smriprep/workflows/surfaces.py 11.90% <0.00%> (-0.08%) ⬇️
smriprep/interfaces/surf.py 40.59% <53.57%> (+4.97%) ⬆️

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mgxd commented Aug 22, 2023

Nope, though looks like it at least ran & completed in the circle tests. I'm using it for #358 so will test be tested there

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mgxd commented Aug 23, 2023

Tested locally 👍

Co-authored-by: Chris Markiewicz <effigies@gmail.com>
@effigies effigies marked this pull request as ready for review August 23, 2023 20:01
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I'm okay with merging this, but you left it in draft state. Good to go?

@mgxd mgxd merged commit 5e60fd8 into nipreps:master Aug 24, 2023
16 of 18 checks passed
@mgxd mgxd deleted the enh/split-surfaces branch August 24, 2023 19:29
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2 participants