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Add support for R based software #1

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chrisgorgo opened this issue Jul 29, 2010 · 2 comments
Open

Add support for R based software #1

chrisgorgo opened this issue Jul 29, 2010 · 2 comments
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0 - Backlog enhancement

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@chrisgorgo
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chrisgorgo commented Jul 29, 2010 •
edited by satra

http://cran.r-project.org/web/packages/fmri/index.html
http://cran.r-project.org/web/packages/dti/index.html
especially adaptive smoothing
chrisgorgo pushed a commit that referenced this issue Nov 22, 2012
@idea-labs-admin
Merge pull request #1 from chrisfilo/jacobian_determinant
a60b790 
Jacobian determinant
chrisgorgo pushed a commit that referenced this issue Dec 14, 2012
@moloney
Merge pull request #1 from chrisfilo/dcmstack
b12d83d 
minor fixes
chrisgorgo pushed a commit that referenced this issue Sep 13, 2013
@alexandschaefer
Merge pull request #1 from chrisfilo/enh/retroicor
e54bdf7 
Enh/retroicor
satra pushed a commit that referenced this issue Oct 31, 2013
@nicholsn
Merge pull request #1 from satra/fix/doctest
849ce6e 
fix: updated doctest, pep8 and unit test
satra pushed a commit that referenced this issue Nov 20, 2013
@mick-d
Merge pull request #1 from satra/tst/mike
6d30d9a 
fix: auto test
satra pushed a commit that referenced this issue Dec 19, 2013
@mluessi
Merge pull request #1 from satra/tst/martin
a3ac6c2 
Tst/martin
satra pushed a commit that referenced this issue Feb 5, 2014
@JensNRAD
Merge pull request #1 from satra/fix/eddy
0836459 
a workflow fix, auto tests and some PEP8 changes
oesteban added a commit that referenced this issue Jul 28, 2014
@oesteban
Merge pull request #1 from juhuntenburg/enh/AddInterfaceFSLWarpUtils
46f38d9 
Enh/add interface fsl warp utils
satra pushed a commit that referenced this issue Sep 12, 2014
@armaneshaghi
Merge pull request #1 from satra/antsct
d409f1c 
Antsct
chrisgorgo pushed a commit that referenced this issue Sep 29, 2014
@stymy
Merge pull request #1 from nipy/master
0f82aac 
pull from nipype
chrisgorgo pushed a commit that referenced this issue Sep 30, 2014
@belevtsoff
Merge pull request #1 from nipy/master
9c2a9b0 
pulled updates from the main repo
satra pushed a commit that referenced this issue Nov 5, 2014
@miykael
Merge pull request #1 from satra/enh/spmnormalize
80034ac 
Enh/spmnormalize
satra pushed a commit that referenced this issue Nov 8, 2014
@blakedewey
Merge pull request #1 from satra/fix/ants
b87be8b 
Fix/ants
@duboism
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duboism commented Jan 29, 2015

Seems an old issue but I was thinking that an R interface could be cool. This should be rather similar to MatlabCommand.

satra pushed a commit that referenced this issue Feb 10, 2015
@psharp1289
Merge pull request #1 from satra/pr1033
a00df37 
Pr1033
satra pushed a commit that referenced this issue Feb 13, 2015
@JDWarner
Merge pull request #1 from nicholsn/fix/ants-flag
788e366 
FIX: Remove extraneous comments
satra pushed a commit that referenced this issue Jul 6, 2015
@blakedewey
Merge pull request #1 from nipy/master
8b83ea1 
Update to current master
@blakedewey
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This is still an old issue, but is definitely worth some time looking at. I currently write a file containing my R code (dynamically generated with filenames, variables etc) and call Rscript on it. Works pretty well actually! We could also use rpy?

chrisgorgo pushed a commit that referenced this issue Feb 3, 2016
@pintohutch
Merge pull request #1 from FCP-INDI/master
e3ad668 
Pull in multiproc
chrisgorgo pushed a commit that referenced this issue Feb 3, 2016
@carolFrohlich
Merge pull request #1 from dclark87/patch-1
f107efd 
Update io.py
satra pushed a commit that referenced this issue Jan 4, 2017
Merge pull request #1 from nipy/master
caf45d7 
update to nipy/nipype master
satra pushed a commit that referenced this issue Mar 16, 2017
@tsalo
Merge pull request #1 from nipy/master
9ffdc91 
Update tsalo/nipype from nipy/nipype
effigies pushed a commit that referenced this issue May 10, 2017
@jdkent
Merge pull request #1 from nipy/master
f286f52 
keeping up to date
@caixixixi caixixixi mentioned this issue May 17, 2017
Closed
satra pushed a commit that referenced this issue May 19, 2017
@byvernault
Merge pull request #1 from mmodat/fix-niftyseg-hdr-copy
91e42d2 
merging master changes
satra pushed a commit that referenced this issue May 26, 2017
@mgxd
Merge pull request #1 from nipy/master
b87d8e5 
merge with upstream
satra pushed a commit that referenced this issue Jun 7, 2017
@juhuntenburg
Merge pull request #1 from satra/julia-mp2rage
49dee43 
fix: check before commit
mvdoc pushed a commit to mvdoc/nipype that referenced this issue Jun 23, 2017
@rmarkello
Merge pull request nipy#1 from tsalo/afni-deconvolve
beb8f53 
Update main command for Deconvolve.
satra pushed a commit that referenced this issue Jul 24, 2017
@62442katieb
Merge pull request #1 from satra/fix/autotests
a724b13 
Fix/autotests
effigies pushed a commit that referenced this issue Feb 23, 2018
@duboism
Merge pull request #1 from nicholsn/docs/rsfmri-example
10b3cc4 
fix: documentation indentation and highlighting
effigies pushed a commit that referenced this issue Apr 24, 2018
@vanandrew
Merge pull request #1 from effigies/fix_afni_allineate
78f68ae 
Suggested changes to #2502
@mrahimpour mrahimpour mentioned this issue Nov 28, 2018
Closed
effigies pushed a commit that referenced this issue Apr 29, 2019
@rciric
Merge pull request #1 from oesteban/rciric-patch-1
01a78ec 
FIX: some traits-5.0.0 don't work with Python 2.7
effigies pushed a commit that referenced this issue Sep 5, 2019
@vferat
Merge pull request #1 from vferat/fix/mne_watershed_bem
1f92bd5 
Fix/mne watershed bem
effigies pushed a commit that referenced this issue Sep 5, 2019
@vferat
Revert "Merge pull request #1 from vferat/fix/mne_watershed_bem"
834df60 
This reverts commit 1f92bd5, reversing
changes made to 8129ff4.
@JoffJones JoffJones mentioned this issue Sep 14, 2020
Open
@themeo themeo mentioned this issue Mar 29, 2022
Open
effigies pushed a commit that referenced this issue Apr 21, 2022
@mnoergaard
Merge pull request #1 from avneet14027/add_pet_freesurfer
08f9c7c 
merge avneets branch into martin's branch (update add_pet_freesurfer)
effigies pushed a commit that referenced this issue May 16, 2022
@ghisvail
Merge pull request #1 from effigies/enh/gunzip-compression
50999b1 
RF: Unify Gzip/Gunzip, make Gzip the base class
effigies pushed a commit that referenced this issue Jul 5, 2023
@pvelasco
Merge pull request #1 from pvelasco/black-formatting
4195b9e 
LINT: Black edits
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@satra @chrisgorgo @duboism @blakedewey