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Open source software for multi-modal optical molecular imaging

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nirfaster/NIRFASTer

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NIRFASTer NIRFASTer

Open source software for multi-modal optical molecular imaging NIRFASTer

MATLAB Compatibility

May not work on MATLAB versions earlier than R2016b.

CUDA Compatibility

  • Compute Capability >= 3.0.

    As a rule of thumb, this is true for Nvidia's GPUs released on 2012 (Kepler) and onwards.

  • Nvidia Driver version >= 418.39.

    Make sure you use the newest Nvidia drivers. The GPU code was compiled with the CUDA Toolkit 10.1. Thus, drivers >=418.39 should work fine.

INSTALL

Set MATLAB path (with subfolders) to the NIRFASTer folder.

VERIFY INSTALL

Run the isCUDA function on MATLAB command window.

Show help for this function running help isCUDA from the command window.

Run nirfasterroot from the command window.

Where to start

Run the test_*.mlx MATLAB Live Code examples to learn how to use the supported modalities.

Read functions help.

License

See the LICENSE.txt file for details.

General architecture

NIRFASTer