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@niu-lab

Beifang Niu's Lab

Niu's Lab at Computer Network Information Center (CNIC) of the Chinese Academy of Sciences (CAS)

Popular repositories Loading

  1. msisensor2 msisensor2 Public

    Microsatellite instability (MSI) detection for tumor only data.

    R 88 21

  2. msisensor-ct msisensor-ct Public

    Microsatellite instability (MSI) detection for cfDNA samples.

    Makefile 17 3

  3. gclust gclust Public

    genome sized sequences clustering

    C++ 12 3

  4. docker-flt3-itd docker-flt3-itd Public

    Python 6

  5. msisensor msisensor Public

    Forked from ding-lab/msisensor

    microsatellite instability detection using tumor only or paired tumor-normal data

    C++ 4 1

  6. DIVIS DIVIS Public

    integrated and customisable pipeline of cancer genome sequencing analysis

    Perl 3 2

Repositories

Showing 10 of 24 repositories
  • msisensor2 Public

    Microsatellite instability (MSI) detection for tumor only data.

    niu-lab/msisensor2’s past year of commit activity
    R 88 GPL-3.0 21 36 0 Updated Apr 23, 2024
  • msisensor2-py Public

    Microsatellite instability (MSI) detection tool of python version for tumor only data .

    niu-lab/msisensor2-py’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Mar 27, 2024
  • DIVIS Public

    integrated and customisable pipeline of cancer genome sequencing analysis

    niu-lab/DIVIS’s past year of commit activity
    Perl 3 2 1 0 Updated Feb 23, 2021
  • msisensor-ct Public

    Microsatellite instability (MSI) detection for cfDNA samples.

    niu-lab/msisensor-ct’s past year of commit activity
    Makefile 17 GPL-3.0 3 8 0 Updated Feb 20, 2021
  • docker-flt3-itd Public
    niu-lab/docker-flt3-itd’s past year of commit activity
    Python 6 GPL-3.0 0 1 0 Updated Feb 15, 2021
  • gclust Public

    genome sized sequences clustering

    niu-lab/gclust’s past year of commit activity
    C++ 12 Apache-2.0 3 4 0 Updated Dec 29, 2020
  • msisensor Public Forked from ding-lab/msisensor

    microsatellite instability detection using tumor only or paired tumor-normal data

    niu-lab/msisensor’s past year of commit activity
    C++ 4 MIT 55 0 0 Updated Sep 3, 2019
  • hotspot3d Public Forked from ding-lab/hotspot3d

    3D hotspot mutation proximity analysis tool

    niu-lab/hotspot3d’s past year of commit activity
    Perl 0 GPL-3.0 27 0 0 Updated Aug 22, 2019
  • GPyFlow-CLI Public

    a light way to run workflow

    niu-lab/GPyFlow-CLI’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jun 10, 2019
  • GPyFlow-Workflows Public

    a workflow platform to share workflow

    niu-lab/GPyFlow-Workflows’s past year of commit activity
    CSS 0 0 0 0 Updated Apr 17, 2019
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