microRNA-sequencing (v1.1.0)

Minor release that include new code file (for RT-qPCR analysis) and a very large rewriting for easier use of the code for differential expression using edgeR (but results should still be the same compared to the previous release).

microRNA-sequencing (v1.0.1)

Include a License to the repository.

microRNA-sequencing (v1.0.0)

This release of microRNA-sequencing repository consist of several linux bash scripts, perl scripts and R scripts used for analysis of a large microRNA-sequencing experiment based on miRBase microRNA annotation database.

This repository also includes pipeline for the use of several analysis tools (Novoalign followed by featureCounts software, miRdeep2 software and miRdeep* software) to compare the generated results and increase results confidence.

Depending on the sequencer used for generation of fastq files and the version of the various softwares used, this repository may need to be optimised on a case by case basis.