Automatic pypi deployment and linting.

.github/workflows/python-publish.yml

@@ -0,0 +1,44 @@
+name: Build, Test, and Upload Python Package
+
+on:
+  push:
+    tags:
+      - "v*.*.*"
+
+  workflow_dispatch:
+
+permissions:
+  contents: read
+
+jobs:
+  # test:
+  #      uses: ./.github/workflows/ubuntu-python-package.yml  # use the callable tests job to run tests
+
+  deploy:
+
+    runs-on: ubuntu-latest
+
+  #  needs: [test]
+
+    steps:
+    - uses: actions/checkout@v3
+
+    - name: Set up Python
+      uses: actions/setup-python@v3
+      with:
+        python-version: "3.11"
+
+    - name: Install dependencies
+      run: |
+        sudo apt-get update
+        python -m pip install --upgrade pip
+
+    - name: Publish to PyPI
+      run: |
+        python -m venv venv
+        . ./venv/bin/activate
+        pip install -U twine build
+        python -m build .
+        python -m twine upload --repository pypi --username __token__ --password ${{ secrets.PYPI }} dist/* 
+      env:
+        PYPI: ${{ secrets.PYPI }}

CHANGELOG.md

@@ -1,4 +1,7 @@
 # Changelog
 
+### Version 0.0.4 (23-04-2024)
+- Automatic PyPi deployment
+
 ### Version 0.0.3 (15-04-2024)
 - Initial release

LICENSE

@@ -1,6 +1,6 @@
 MIT License
 
-Copyright (c) 2023 Julia Pfitzer
+Copyright (c) 2023 jupfi
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal

README.md

@@ -27,11 +27,16 @@ Ideally you should install the module in a virtual environment. You can create a
 python -m venv nqrduck
 ```
 
-You can install this module and the dependencies by running the following command in the terminal:
+You can install this module and the dependencies by running the following command in the terminal after cloning the repositor and navigating to the module directory:
 ```bash
 pip install .
 ```
 
+Alternatively you can install the module via the PyPi package manager by running the following command in the terminal:
+```bash
+pip install nqrduck-spectrometer-limenqr
+```
+
 ## Usage
 The module is used together with the NQRduck [pulseprogrammer](htpps://github.com/nqrduck-pulseprogrammer) module.
 

pyproject.toml

@@ -7,9 +7,9 @@ allow-direct-references = true
 
 [project]
 name = "nqrduck-spectrometer-limenqr"
-version = "0.0.3"
+version = "0.0.4"
 authors = [
-  { name="Julia Pfitzer", email="git@jupfi.me" },
+  { name="jupfi", email="support@nqrduck.cool" },
 ]
 
 description = "A submodule for the nqrduck-spectrometer module which implements the functionality for the LimeNQR spectrometer."
@@ -20,16 +20,41 @@ requires-python = ">=3.8"
 classifiers = [
     "Programming Language :: Python :: 3",
     "License :: OSI Approved :: MIT License",
-    "Operating System :: OS Independent",
+    "Operating System :: POSIX :: Linux",
 ]
 
 dependencies = [
-    "limedriver @ git+https://github.com/nqrduck/LimeDriverBindings",
+    "limedriver",
     "nqrduck-spectrometer",
     "pyqt6",
     "h5py",
     "pyserial",
 ]
 
 [project.entry-points."nqrduck"]
-"nqrduck-spectrometer-limenqr" = "nqrduck_spectrometer_limenqr.limenqr:LimeNQR"
+"nqrduck-spectrometer-limenqr" = "nqrduck_spectrometer_limenqr.limenqr:LimeNQR"
+
+[tool.ruff]
+exclude = [
+  "widget.py",
+]
+
+[tool.ruff.lint]
+extend-select = [
+  "UP",  # pyupgrade
+  "D",   # pydocstyle
+]
+
+[tool.ruff.lint.per-file-ignores]
+"__init__.py" = ["F401"]
+
+[tool.ruff.lint.pydocstyle]
+convention = "google"
+
+[project.urls]
+"Homepage" = "https://nqrduck.cool"
+"Bug Tracker" = "https://github.com/nqrduck/nqrduck-spectrometer-limenqr/issues"
+"Source Code" = "https://github.com/nqrduck/nqrduck-spectrometer-limenqr"
+
+[tool.hatch.build.targets.wheel]
+packages = ["src/nqrduck_spectrometer_limenqr"]

src/nqrduck_spectrometer_limenqr/controller.py

@@ -7,7 +7,6 @@
 from limedriver.binding import PyLimeConfig
 from limedriver.hdf_reader import HDF
 
-from nqrduck.module.module_controller import ModuleController
 from nqrduck_spectrometer.base_spectrometer_controller import BaseSpectrometerController
 from nqrduck_spectrometer.measurement import Measurement
 from nqrduck_spectrometer.pulseparameters import TXPulse, RXReadout
@@ -166,7 +165,8 @@ def find_evaluation_range_indices(self, hdf, rx_begin, rx_stop):
             rx_stop (float): The stop time of the RX event in µs
         
         Returns:
-            list: The indices of the evaluation range in the measurement data"""
+        list: The indices of the evaluation range in the measurement data
+        """
         return np.where((hdf.tdx > rx_begin) & (hdf.tdx < rx_stop))[0]
 
     def extract_measurement_data(self, lime, hdf, indices):
@@ -190,7 +190,8 @@ def get_fft_shift(self):
         """This method returns the FFT shift value from the settings.
         
         Returns:
-            int: The FFT shift value"""
+        int: The FFT shift value
+        """
         fft_shift_enabled = self.module.model.get_setting_by_name(self.module.model.FFT_SHIFT).value
         return self.module.model.if_frequency if fft_shift_enabled else 0
 
@@ -237,8 +238,8 @@ def update_settings(self, lime):
             lime (PyLimeConfig): The PyLimeConfig object that is used to communicate with the pulseN driver
 
         Returns:
-            lime: The updated limr object"""
-
+        lime: The updated limr object
+        """
         logger.debug(
             "Updating settings for spectrometer: %s for measurement",
             self.module.model.name,
@@ -352,13 +353,12 @@ def translate_pulse_sequence(self, lime):
         return lime
 
     def get_number_of_pulses(self):
-        """ This method calculates the number of pulses in the pulse sequence before the LimeDriverBinding is initialized.
+        """This method calculates the number of pulses in the pulse sequence before the LimeDriverBinding is initialized.
         This makes sure it"s initialized with the correct size of the pulse lists.
         
         Returns:
             int: The number of pulses in the pulse sequence
         """
-
         events = self.fetch_pulse_sequence_events()
         num_pulses = 0
         for event in events:
@@ -390,7 +390,8 @@ def is_translatable_tx_parameter(self, parameter):
         """This method checks if a parameter a pulse with a transmit pulse shape (amplitude nonzero)
         
         Args:
-            parameter (Parameter): The parameter to check"""
+        parameter (Parameter): The parameter to check
+        """
         return (parameter.name == self.module.model.TX and
                 parameter.get_option_by_name(TXPulse.RELATIVE_AMPLITUDE).value > 0)
 
@@ -402,7 +403,8 @@ def prepare_pulse_amplitude(self, event, parameter):
             parameter (Parameter): The parameter that contains the pulse shape and amplitude
         
         Returns:
-            tuple: A tuple containing the pulse shape and the pulse amplitude"""
+        tuple: A tuple containing the pulse shape and the pulse amplitude
+        """
         pulse_shape = parameter.get_option_by_name(TXPulse.TX_PULSE_SHAPE).value
         pulse_amplitude = abs(pulse_shape.get_pulse_amplitude(event.duration)) * \
                           parameter.get_option_by_name(TXPulse.RELATIVE_AMPLITUDE).value
@@ -433,7 +435,8 @@ def unwrap_phase(self, phase):
         """This method unwraps the phase of the pulse.
         
         Args:
-            phase (float): The phase of the pulse"""
+        phase (float): The phase of the pulse
+        """
         return (np.unwrap(phase) + 2 * np.pi) % (2 * np.pi)
 
     def initialize_pulse_lists(self, lime, pulse_amplitude, pulse_shape, modulated_phase):
@@ -624,7 +627,8 @@ def set_averages(self, value: int):
         """This method sets the number of averages for the spectrometer.
 
         Args:
-            value (int): The number of averages"""
+        value (int): The number of averages
+        """
         logger.debug("Setting averages to: %s", value)
         try:
             self.module.model.averages = int(value)