What's new?

hnn_core

Current

Add ability to simulate multiple trials in parallel using joblibs, by Mainak Jas in #44
Rhythmic inputs can now be turned off by setting their conductance weights to 0 instead of setting their start times to exceed the simulation stop time, by Ryan Thorpe in #105
Reader for parameter files, by Blake Caldwell in #80
Add plotting of voltage at soma to inspect firing pattern of cells, by Mainak Jas in #86
Add ability to simulate a single trial in parallel across cores using MPI, by Blake Caldwell in #79
Modify plot_dipole() to accept both lists and individual instances of Dipole object, by Nick Tolley in #145
Update plot_hist_input() to plot_spikes_hist() which can plot histogram of spikes for any cell type, by Nick Tolley in #157
Add function to compute mean spike rates with user specified calculation type, by Nick Tolley and Mainak Jas in #155
Add ability to record somatic voltages from all cells, by Nick Tolley in #190

Fix missing autapses in network construction, by Mainak Jas in #50
Fix rhythmic input feed, by Ryan Thorpe in #98
Fix bug introduced into rhythmic input feed and add test, by Christopher Bailey in #102
Fix bug in amplitude of delay (for connection between L2 Basket and Gaussian feed) being passed incorrectly, by Mainak Jas in #146
Connections now cannot be removed by setting the weights to 0., by Mainak Jas and Ryan Thorpe in #162
MPI and Joblib backends now apply jitter across multiple trials identically, by Ryan Thorpe in #171

Make a context manager for Network class, by Mainak Jas and Blake Caldwell in #86
Create Spikes class, add write methods and read functions for Spikes and Dipole classes, by Ryan Thorpe in #96
Only specify n_jobs when instantiating the JoblibBackend, by Blake Caldwell in #79
Make a context manager for parallel backends (JoblibBackend, MPIBackend), by Blake Caldwell in #79
Add average_dipoles function to hnn_core.dipole, by Blake Caldwell in #156