WARNING: toctree contains reference to nonexisting document

[pastephens]

I get thousands of these warnings when I compile my docs with the numpydoc extension. Numpydoc appears to descend into every nook and cranny of our code base, and adds items to the toctree when it finds them? For instance, most of these warnings pertain to object attributes, like this:

None:None: WARNING: toctree contains reference to nonexisting document u'library/spreg/pysal.spreg.twosls_sp.GM_Lag.pfora1a2'

Is there a way to stop this?

[takluyver]

From this SO question, most of them can be suppressed by setting numpydoc_show_class_members = False in the conf.py file. However, in IPython that still leaves a few warnings.

[takluyver]

My PR #6 adds a numpydoc_class_members_toctree option, to keep the autosummary tables of methods and attributes, but not try to make them a table of contents.

[pv]

Addressed in gh-6

[pastephens]

Thank you. Now I can see all the real problems with my docs ;-)