new release

obophenotype · Jul 10, 2018 · d546f28 · d546f28
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commit d546f28
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Showing 18 changed files with 89,778 additions and 5,204 deletions.
diff --git a/cl-base.owl b/cl-base.owl
diff --git a/cl-basic.obo b/cl-basic.obo
@@ -3,9 +3,18 @@ subsetdef: ubprop:upper_level "abstract upper-level terms not directly useful fo
 synonymtypedef: HUMAN_PREFERRED "preferred term when talking about an instance of this class in Homo sapiens"
 synonymtypedef: LATIN "latin term"
 synonymtypedef: PLURAL "plural term"
-remark: See PMID:15693950, PMID:12799354, PMID:20123131, PMID:21208450; Contact Alexander Diehl, addiehl@buffalo.edu, University at Buffalo.
 ontology: cl/cl-basic
+property_value: http://purl.org/dc/elements/1.1/contributor "Alexander Diehl" xsd:string
+property_value: http://purl.org/dc/elements/1.1/contributor "Ceri van Slyke" xsd:string
+property_value: http://purl.org/dc/elements/1.1/contributor "Chris Mungall" xsd:string
+property_value: http://purl.org/dc/elements/1.1/contributor "David Osumi-Sutherland" xsd:string
+property_value: http://purl.org/dc/elements/1.1/contributor "Jim Balhoff" xsd:string
+property_value: http://purl.org/dc/elements/1.1/contributor "Melissa Haendel" xsd:string
+property_value: http://purl.org/dc/elements/1.1/contributor "Nicole Vasilevsky" xsd:string
+property_value: http://purl.org/dc/elements/1.1/contributor "Terry Meehan" xsd:string
+property_value: http://purl.org/dc/elements/1.1/contributor "Yvonne Bradford" xsd:string
 property_value: http://purl.org/dc/elements/1.1/license http://creativecommons.org/licenses/by/4.0/
+property_value: seeAlso http://obofoundry.org/ontology/cl.html
 
 [Term]
 id: CL:0000000
@@ -22395,10 +22404,3 @@ id: lacks_plasma_membrane_part
 name: lacks_plasma_membrane_part
 expand_expression_to: "http://purl.obolibrary.org/obo/BFO_0000051 exactly 0 (http://purl.obolibrary.org/obo/GO_0005886 and http://purl.obolibrary.org/obo/BFO_0000051 some ?Y)" []
 
-[Typedef]
-id: seeAlso
-name: see also
-namespace: uberon
-xref: http://www.w3.org/2000/01/rdf-schema#seeAlso
-is_metadata_tag: true
-
diff --git a/cl-basic.owl b/cl-basic.owl
@@ -1,19 +1,28 @@
 <?xml version="1.0"?>
 <rdf:RDF xmlns="http://purl.obolibrary.org/obo/cl/cl-basic.owl#"
      xml:base="http://purl.obolibrary.org/obo/cl/cl-basic.owl"
-     xmlns:dc="http://purl.org/dc/elements/1.1/"
+     xmlns:ubprop="http://purl.obolibrary.org/obo/ubprop#"
-     xmlns:obo="http://purl.obolibrary.org/obo/"
+     xmlns:uberon="http://purl.obolibrary.org/obo/uberon#"
-     xmlns:owl="http://www.w3.org/2002/07/owl#"
      xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
+     xmlns:owl="http://www.w3.org/2002/07/owl#"
+     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
      xmlns:xml="http://www.w3.org/XML/1998/namespace"
      xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
      xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
-     xmlns:uberon="http://purl.obolibrary.org/obo/uberon#"
+     xmlns:obo="http://purl.obolibrary.org/obo/"
-     xmlns:ubprop="http://purl.obolibrary.org/obo/ubprop#"
+     xmlns:dc="http://purl.org/dc/elements/1.1/">
-     xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/cl/cl-basic.owl">
+        <dc:contributor>Chris Mungall</dc:contributor>
         <dc:license rdf:resource="http://creativecommons.org/licenses/by/4.0/"/>
-        <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">See PMID:15693950, PMID:12799354, PMID:20123131, PMID:21208450; Contact Alexander Diehl, addiehl@buffalo.edu, University at Buffalo.</rdfs:comment>
+        <dc:contributor>Ceri van Slyke</dc:contributor>
+        <dc:contributor>Melissa Haendel</dc:contributor>
+        <dc:contributor>Terry Meehan</dc:contributor>
+        <dc:contributor>Yvonne Bradford</dc:contributor>
+        <rdfs:seeAlso rdf:resource="http://obofoundry.org/ontology/cl.html"/>
+        <dc:contributor>David Osumi-Sutherland</dc:contributor>
+        <dc:contributor>Nicole Vasilevsky</dc:contributor>
+        <dc:contributor>Jim Balhoff</dc:contributor>
+        <dc:contributor>Alexander Diehl</dc:contributor>
     </owl:Ontology>
 
 
@@ -314,13 +323,7 @@
 
     <!-- http://www.w3.org/2000/01/rdf-schema#seeAlso -->
 
-    <owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#seeAlso">
+    <owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#seeAlso"/>
-        <oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">http://www.w3.org/2000/01/rdf-schema#seeAlso</oboInOwl:hasDbXref>
-        <oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">uberon</oboInOwl:hasOBONamespace>
-        <oboInOwl:is_metadata_tag rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</oboInOwl:is_metadata_tag>
-        <oboInOwl:shorthand rdf:datatype="http://www.w3.org/2001/XMLSchema#string">seeAlso</oboInOwl:shorthand>
-        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">see also</rdfs:label>
-    </owl:AnnotationProperty>
 
 
 
@@ -47723,5 +47726,5 @@ plexiform layer using GABA. </owl:annotatedTarget>
 
 
 
-<!-- Generated by the OWL API (version 4.5.0) https://github.com/owlcs/owlapi -->
+<!-- Generated by the OWL API (version 4.2.8) https://github.com/owlcs/owlapi -->
 
diff --git a/cl.obo b/cl.obo